RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 MPSTP25325 297 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 PBX3P40426 434 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 PCSK7Q16549 785 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 ARL13BQ3SXY8 428 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 SLC9B1Q4ZJI4 515 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 ST13P4Q8IZP2 240 aaPredicted RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 ICA1LQ8NDH6 482 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 OR6Y1Q8NGX8 325 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 SOCS4Q8WXH5 440 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 PPWD1Q96BP3 646 aaKnown RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 FCRL2Q96LA5 508 aaPredicted RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 OR52B2Q96RD2 323 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 PRPF18Q99633 342 aaKnown RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 ACBD6Q9BR61 282 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 TASP1Q9H6P5 420 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 LRRC40Q9H9A6 602 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 LIN28AQ9H9Z2 209 aaKnown RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 DMAP1Q9NPF5 467 aaPredicted RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 TET1Q8NFU7 2136 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 MIA3Q5JRA6 1907 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 A0A096LPK6 155 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 G3V2L1 256 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 PMPCBO75439 489 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 TOMM70O94826 608 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 RPL10P27635 214 aaKnown RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 PCSK1P29120 753 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 GATMP50440 423 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 TMED1Q13445 227 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 EIF4EBP2Q13542 120 aaPredicted RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 CNGA3Q16281 694 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 GEN1Q17RS7 908 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 FBXO48Q5FWF7 155 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 ESRP1Q6NXG1 681 aaKnown RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 CIR1Q86X95 450 aaPredicted RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 LINC01599Q8WXQ3 324 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 EPAS1Q99814 870 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 TRPV6Q9H1D0 765 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 THAP1Q9NVV9 213 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 ZNF195O14628 629 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 TNFRSF10BO14763 440 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 IRAK2O43187 625 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 GLRA3O75311 464 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 IGLV3-25P01717 112 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 HLA-DQB2P05538 268 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 SBK3P0C264 359 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 SEPT6Q14141 434 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 SPANXN3Q5MJ09 141 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 MYEOVQ96EZ4 313 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 MPP4Q96JB8 637 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 LENG8Q96PV6 779 aaPredicted RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 GTSE1Q9NYZ3 720 aa13.9□□□□□ -0.18
CCDC142-202ENST00000393965 COL4A4P53420 1690 aaPredicted RBP13.9□□□□□ -0.18
CCDC142-202ENST00000393965 ATP6AP2A0A1C7CYW4 349 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 MAFKO60675 156 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 ATP6AP2O75787 350 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 IL1BP01584 269 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 C2P06681 752 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 ARNTP27540 789 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 RAB27AP51159 221 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CNPY1Q3B7I2 92 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 ZNF789Q5FWF6 425 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 PITRM1Q5JRX3 1037 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 C6orf52Q5T4I8 152 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CWF19L1Q69YN2 538 aaKnown RBP13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CYS1Q717R9 158 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 SLC41A1Q8IVJ1 513 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 SH3RF2Q8TEC5 729 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 KLHL5Q96PQ7 755 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 TUBB6Q9BUF5 446 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 FICDQ9BVA6 458 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 KLHL4Q9C0H6 718 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CNTN5O94779 1100 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
CCDC142-202ENST00000393965 LIMK2P53671 638 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 NAGLUP54802 743 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 MFSD14CQ5VZR4 134 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 DENND5AQ6IQ26 1287 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 KYAT3Q6YP21 454 aaKnown RBP13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CEP97Q8IW35 865 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 B4GALNT2Q8NHY0 566 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 VPS39Q96JC1 886 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
CCDC142-202ENST00000393965 COG4Q9H9E3 785 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 SPC25Q9HBM1 224 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 HS3ST4Q9Y661 456 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 A0A1B0GTW7 788 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 M0QZQ0 153 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 BIRC5O15392 142 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 AHSGP02765 367 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CPA3P15088 417 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 PMLP29590 882 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 PIK3R6Q5UE93 754 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms