RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 CD38P28907 300 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PUDPQ08623 228 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 IFI16Q16666 785 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PHKG1Q16816 387 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 FHL5Q5TD97 284 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 TMEM154Q6P9G4 183 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 SIRT2Q8IXJ6 389 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CCDC116Q8IYX3 515 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CADM4Q8NFZ8 388 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 OR2T34Q8NGX1 318 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CLDN23Q96B33 292 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ABCG8Q9H221 673 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 VPS11Q9H270 941 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 NEUROD4Q9HD90 331 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 TCF7L2Q9NQB0 619 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 C20orf96Q9NUD7 363 aaPredicted RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 NDUFA13Q9P0J0 144 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PDP2Q9P2J9 529 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CACNA1HO95180 2353 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PHIPQ8WWQ0 1821 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CCDC187A0A096LP49 1063 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 MYBPHLA2RUH7 354 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CCDC151A5D8V7 595 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 EFCAB8A8MWE9 144 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 NARSO43776 548 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PAHP00439 452 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 FYNP06241 537 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 RARGP13631 454 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 TMEM11P17152 192 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CD27P26842 260 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PSMD8P48556 350 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 MAPK10P53779 464 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 RPP38P78345 283 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 IRX4P78413 519 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 SCAPQ12770 1279 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 LRMPQ12912 555 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ZMYND11Q15326 602 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 DHCR24Q15392 516 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 KCTD16Q68DU8 428 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 TAF8Q7Z7C8 310 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 JAZF1Q86VZ6 243 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CACUL1Q86Y37 369 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 OR10G6Q8NH81 332 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 GRK7Q8WTQ7 553 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PDCD6IPQ8WUM4 868 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ZFAND2BQ8WV99 257 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 S1PR5Q9H228 398 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ARMCX3Q9UH62 379 aaPredicted RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PCDHGB2Q9Y5G2 931 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 LACTBL1A8MY62 500 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 FAM86B1E9PN63 330 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 TAF4O00268 1085 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 MEFVO15553 781 aaPredicted RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CTIFO43310 598 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CCNE2O96020 404 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 FAM86B2P0C5J1 330 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 PTPN1P18031 435 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 KRT15P19012 456 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 JAK1P23458 1154 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CXCR2P25025 360 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 GNG11P61952 73 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 MBTD1Q05BQ5 628 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 KLHL30Q0D2K2 578 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 TAF10Q12962 218 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ZNF211Q13398 564 aaPredicted RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 VWA2Q5GFL6 755 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CENPPQ6IPU0 288 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 RBM44Q6ZP01 1051 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 RAB43Q86YS6 212 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 LNX1Q8TBB1 728 aaPredicted RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 SGK3Q96BR1 496 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 NMD3Q96D46 503 aaKnown RBP8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CHMP6Q96FZ7 201 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 KLHL25Q9H0H3 589 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 ARHGEF38Q9NXL2 777 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 GMIPQ9P107 970 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 FAM8A1Q9UBU6 413 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 EBF1Q9UH73 591 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 FADS3Q9Y5Q0 445 aa8.22□□□□□ -1.09
LIMS1-203ENST00000393310 CCDC162PA2VCL2 907 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 TTLL8A6PVC2 850 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 LEFTY2O00292 366 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 LIN7AO14910 233 aaPredicted RBP8.21□□□□□ -1.09
LIMS1-203ENST00000393310 PDGFBP01127 241 aaPredicted RBP8.21□□□□□ -1.09
LIMS1-203ENST00000393310 TNFP01375 233 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 PCNAP12004 261 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 VAMP1P23763 118 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 GJA4P35212 333 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.09
LIMS1-203ENST00000393310 CYP4F3Q08477 520 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 ZNF235Q14590 738 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 SMAD1Q15797 465 aaKnown RBP8.21□□□□□ -1.09
LIMS1-203ENST00000393310 MINDY4Q4G0A6 757 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 IGSF11Q5DX21 431 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 IKBIPQ70UQ0 350 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 GPR135Q8IZ08 494 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 TERB1Q8NA31 727 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 ASAP3Q8TDY4 903 aa8.21□□□□□ -1.09
LIMS1-203ENST00000393310 OTUD7AQ8TE49 926 aaPredicted RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms