RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SEPT6Q14141 434 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ZNF460Q14592 562 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ARL13AQ5H913 290 aaPredicted RBP11□□□□□ -0.65
BRF1-204ENST00000392557 GRTP1Q5TC63 336 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ATG14Q6ZNE5 492 aa11□□□□□ -0.65
BRF1-204ENST00000392557 PAQR9Q6ZVX9 377 aa11□□□□□ -0.65
BRF1-204ENST00000392557 FAM35AQ86V20 835 aa11□□□□□ -0.65
BRF1-204ENST00000392557 KCNMB4Q86W47 210 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ZNF567Q8N184 647 aa11□□□□□ -0.65
BRF1-204ENST00000392557 RNF139Q8WU17 664 aa11□□□□□ -0.65
BRF1-204ENST00000392557 HNRNPABQ99729 332 aaKnown RBP11□□□□□ -0.65
BRF1-204ENST00000392557 RTKNQ9BST9 563 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ATXN10Q9UBB4 475 aa11□□□□□ -0.65
BRF1-204ENST00000392557 CA12O43570 354 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 TNFAIP8O95379 198 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 WARSP23381 471 aaKnown RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 PTPN9P43378 593 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 RPL14P50914 215 aaKnown RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 SCNN1BP51168 640 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 GJA9P57773 515 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 LRRC8EQ6NSJ5 796 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 EXT2Q93063 718 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 NAT9Q9BTE0 207 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 SIK2Q9H0K1 926 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 EFCAB1Q9HAE3 211 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 Q9Y3F1 56 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 PCDHB12Q9Y5F1 795 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 HDAC3O15379 428 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 SEPT4O43236 478 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 PSMC3P17980 439 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 PLK1P53350 603 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 NME5P56597 212 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 PDAP1Q13442 181 aaKnown RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 LSAMPQ13449 338 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 SLC25A52Q3SY17 297 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 RWDD4Q6NW29 188 aaKnown RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 KLHDC10Q6PID8 442 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 DIS3LQ8TF46 1054 aaKnown RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 PDCD6IPQ8WUM4 868 aaKnown RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 KCTD4Q8WVF5 259 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 CELF6Q96J87 481 aaKnown RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 FCRL3Q96P31 734 aaPredicted RBP10.99□□□□□ -0.65
BRF1-204ENST00000392557 PIGVQ9NUD9 493 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 TMEM30AQ9NV96 361 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 MKS1Q9NXB0 559 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 CCDC167Q9P0B6 97 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 STK39Q9UEW8 545 aa10.99□□□□□ -0.65
BRF1-204ENST00000392557 TMEM233B4DJY2 109 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 DPYSL2Q16555 572 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 RTP4Q96DX8 246 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 TMEM209Q96SK2 561 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 SMOQ99835 787 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 SENP6Q9GZR1 1112 aaPredicted RBP10.98□□□□□ -0.65
BRF1-204ENST00000392557 LIN28AQ9H9Z2 209 aaKnown RBP10.98□□□□□ -0.65
BRF1-204ENST00000392557 CHST12Q9NRB3 414 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 MTMR10Q9NXD2 777 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 NDUFA13Q9P0J0 144 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 C6orf203Q9P0P8 240 aaPredicted RBP10.98□□□□□ -0.65
BRF1-204ENST00000392557 AURKCQ9UQB9 309 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 PRG3Q9Y2Y8 225 aaPredicted RBP10.98□□□□□ -0.65
BRF1-204ENST00000392557 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.98□□□□□ -0.65
BRF1-204ENST00000392557 HNRNPCP07910 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
BRF1-204ENST00000392557 OR4Q2P0C623 313 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 HNRNPLP14866 589 aaKnown RBP eCLIP10.98□□□□□ -0.65
BRF1-204ENST00000392557 TFEBP19484 476 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 GALK1P51570 392 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 TPI1P60174 286 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 RALGDSQ12967 914 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 PRPSAP1Q14558 356 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 POU6F1Q14863 301 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 TIFABQ6ZNK6 161 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 SERINC5Q86VE9 423 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 SCN4BQ8IWT1 228 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 ATP6V1E2Q96A05 226 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 MYLPFQ96A32 169 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 VPS39Q96JC1 886 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 PKP2Q99959 881 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 PCDHAC1Q9H158 963 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 UBAP1Q9NZ09 502 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 ARHGEF37A1IGU5 675 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 DNAJA2O60884 412 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 GSRP00390 522 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 JCHAINP01591 159 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 ITGB1P05556 798 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 LRPAP1P30533 357 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 NOS2P35228 1153 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 CAP1Q01518 475 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 XKR4Q5GH76 650 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 EPGNQ6UW88 154 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 PDZD4Q76G19 769 aaPredicted RBP10.98□□□□□ -0.65
BRF1-204ENST00000392557 ADGRG6Q86SQ4 1221 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 KBTBD6Q86V97 674 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 METTL23Q86XA0 190 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 ZNF354CQ86Y25 554 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 ACVR1CQ8NER5 493 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 RBBP8Q99708 897 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 ATXN3LQ9H3M9 355 aa10.98□□□□□ -0.65
BRF1-204ENST00000392557 FAM124BQ9H5Z6 455 aaPredicted RBP10.98□□□□□ -0.65
BRF1-204ENST00000392557 FAM72CH0Y354 149 aa10.97□□□□□ -0.65
BRF1-204ENST00000392557 H3BSA7 217 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms