RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SPON2Q9BUD6 331 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 SLC17A6Q9P2U8 582 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 TCAF1Q9Y4C2 921 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 LOC285095A0A1B0GVY8 99 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 MUSKO15146 869 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 LUC7L3O95232 432 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 ADRA1DP25100 572 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 DDX6P26196 483 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 CCT5P48643 541 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 BMPR2Q13873 1038 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 CAMK1Q14012 370 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 POU6F1Q14863 301 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 SLC1A5Q15758 541 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 TEDDM1Q5T9Z0 273 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 GRTP1Q5TC63 336 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 MROH9Q5TGP6 573 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 PDPK2PQ6A1A2 396 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 CPLX4Q7Z7G2 160 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 KCNMB4Q86W47 210 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 TCP10LQ8TDR4 215 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 MICAL1Q8TDZ2 1067 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 TMA16Q96EY4 203 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 RANBP9Q96S59 729 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 FAM107BQ9H098 131 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 MAN1C1Q9NR34 630 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 IL1RAPL1Q9NZN1 696 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 TXNDC16Q9P2K2 825 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 SH3BP1Q9Y3L3 701 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 PSAT1Q9Y617 370 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 DOCK6Q96HP0 2047 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 H0Y626 953 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 NRG2O14511 850 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 GRM6O15303 877 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 ARHGEF15O94989 841 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 CSPG5O95196 566 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 EPOP01588 193 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 GLDCP23378 1020 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 CHRNA4P43681 627 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 SERPINH1P50454 418 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 STXBP5Q5T5C0 1151 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 RNF219Q5W0B1 726 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 FOXR1Q6PIV2 292 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 LVRNQ6Q4G3 990 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 RGS9BPQ6ZS82 235 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 LRRC34Q8IZ02 419 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 ACMSDQ8TDX5 336 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 FEM1CQ96JP0 617 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF778Q96MU6 729 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 SLC46A2Q9BY10 475 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 MUC3BQ9H195 1237 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 C20orf96Q9NUD7 363 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 NSMCE4AQ9NXX6 385 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 CFAP97Q9P2B7 532 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 ARHGAP26Q9UNA1 814 aa11.59□□□□□ -0.55
SMARCAL1-203ENST00000392128 NOTCH4Q99466 2003 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SOBPA7XYQ1 873 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 TCP11X1B4DZS4 312 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 COPEO14579 308 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 ITGA2BP08514 1039 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 VIMP08670 466 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 MYOGP15173 224 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 GJA1P17302 382 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 PTPN2P17706 415 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 IRS1P35568 1242 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 CCR2P41597 374 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 MSLNQ13421 630 aaPredicted RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SEPT7Q16181 437 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 PDK4Q16654 411 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 QPCTQ16769 361 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 MPP7Q5T2T1 576 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 HHATQ5VTY9 493 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 PDE12Q6L8Q7 609 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 KDELC2Q7Z4H8 507 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SPRED2Q7Z698 418 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 CARNMT1Q8N4J0 409 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SHKBP1Q8TBC3 707 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 TGS1Q96RS0 853 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 RBBP8Q99708 897 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 PAIP2Q9BPZ3 127 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 NSRP1Q9H0G5 558 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 TREX1Q9NSU2 369 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 HCFC1R1Q9NWW0 138 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 TTC24A2A3L6 582 aaPredicted RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 HEATR9A2RTY3 570 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 LEFTY2O00292 366 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SCAMP3O14828 347 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 CLASP2O75122 1294 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SERPINF2P08697 491 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 HNRNPA1P09651 372 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 ATXN1LP0C7T5 689 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 DHRS4L1P0CG22 281 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 ALADP13716 330 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 CES1P23141 567 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 ETV4P43268 484 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 CSE1LP55060 971 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 ARF5P84085 180 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 HSP90AA5PQ58FG0 334 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms