RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 VPS16Q9H269 839 aa23.1■■□□□ 1.29
VLDLR-201ENST00000382096 SIK3Q9Y2K2 1263 aa23.1■■□□□ 1.29
VLDLR-201ENST00000382096 PIEZO2Q9H5I5 2752 aa23.1■■□□□ 1.29
VLDLR-201ENST00000382096 CXorf51AA0A1B0GTR3 108 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 FAM170AA1A519 330 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 K7ESM1 405 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 EPHB6O15197 1021 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 ZNF821O75541 412 aaPredicted RBP23.09■■□□□ 1.29
VLDLR-201ENST00000382096 GFPT2O94808 682 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 PCDH8O95206 1070 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 MYF5P13349 255 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 SOX5P35711 763 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 POLR2FP61218 127 aaKnown RBP23.09■■□□□ 1.29
VLDLR-201ENST00000382096 HNRNPKP61978 463 aaKnown RBP eCLIP23.09■■□□□ 1.292e-9■■■■■ 30.5
VLDLR-201ENST00000382096 NRG1Q02297 640 aaPredicted RBP23.09■■□□□ 1.29
VLDLR-201ENST00000382096 SEL1L3Q68CR1 1132 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 C22orf39Q6P5X5 142 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 Q6ZSR6 202 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 CHST14Q8NCH0 376 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 OR7D4Q8NG98 312 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 SNRNP27Q8WVK2 155 aaKnown RBP23.09■■□□□ 1.29
VLDLR-201ENST00000382096 KCNE4Q8WWG9 221 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 DPH1Q9BZG8 443 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 CEP44Q9C0F1 390 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 ABCG4Q9H172 646 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 METTL5Q9NRN9 209 aaKnown RBP23.09■■□□□ 1.29
VLDLR-201ENST00000382096 DNAJC28Q9NX36 388 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 SSUH2Q9Y2M2 353 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 CHD5Q8TDI0 1954 aa23.09■■□□□ 1.29
VLDLR-201ENST00000382096 J3QKU1 62 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 SRGAP2O75044 1071 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 GSCP56915 257 aaPredicted RBP23.08■■□□□ 1.29
VLDLR-201ENST00000382096 SLC20A2Q08357 652 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 ARHGAP40Q5TG30 622 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 MANEALQ5VSG8 457 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 RETSATQ6NUM9 610 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 LINGO4Q6UY18 593 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 KYAT3Q6YP21 454 aaKnown RBP23.08■■□□□ 1.29
VLDLR-201ENST00000382096 TRIM72Q6ZMU5 477 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 PTAR1Q7Z6K3 402 aaPredicted RBP23.08■■□□□ 1.29
VLDLR-201ENST00000382096 EMC1Q8N766 993 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 ZNF548Q8NEK5 533 aaPredicted RBP23.08■■□□□ 1.29
VLDLR-201ENST00000382096 GRIN3AQ8TCU5 1115 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 PPP1R16AQ96I34 528 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 BMFQ96LC9 184 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 RETREG1Q9H6L5 497 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 THSD1Q9NS62 852 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 FAM207AQ9NSI2 230 aaPredicted RBP23.08■■□□□ 1.29
VLDLR-201ENST00000382096 IL36AQ9UHA7 158 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 HS3ST3A1Q9Y663 406 aa23.08■■□□□ 1.29
VLDLR-201ENST00000382096 C2CD4BA6NLJ0 364 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 NEBLO76041 1014 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 TPM2P07951 284 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 UNGP13051 313 aaPredicted RBP23.07■■□□□ 1.28
VLDLR-201ENST00000382096 SERPINH1P50454 418 aaKnown RBP23.07■■□□□ 1.28
VLDLR-201ENST00000382096 ATP11AP98196 1134 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 FZD2Q14332 565 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 ISXQ2M1V0 245 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 CCDC14Q49A88 953 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 ZNF542PQ5EBM4 170 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 FKBP15Q5T1M5 1219 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 ZCCHC8Q6NZY4 707 aaKnown RBP23.07■■□□□ 1.28
VLDLR-201ENST00000382096 IFI44Q8TCB0 444 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 MAPK15Q8TD08 544 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 GPT2Q8TD30 523 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 CENPIQ92674 756 aaPredicted RBP23.07■■□□□ 1.28
VLDLR-201ENST00000382096 FANCLQ9NW38 375 aa23.07■■□□□ 1.28
VLDLR-201ENST00000382096 SPTY2D1-AS1A0A0U1RR47 76 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 POM121BA6NF01 834 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 RIOK3O14730 519 aaKnown RBP23.06■■□□□ 1.28
VLDLR-201ENST00000382096 KLK10O43240 276 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 LEFTY1O75610 366 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 CSF2P04141 144 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 NME1P15531 152 aaKnown RBP23.06■■□□□ 1.28
VLDLR-201ENST00000382096 SDC4P31431 198 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 ADRA1BP35368 520 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 PTPN9P43378 593 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 NEK3P51956 506 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 RPS21P63220 83 aaKnown RBP23.06■■□□□ 1.28
VLDLR-201ENST00000382096 ARF5P84085 180 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 GNA12Q03113 381 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 PTP4A2Q12974 167 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 FGL2Q14314 439 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 RAB6CQ53S08 254 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 ARSIQ5FYB1 569 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 KIAA1161Q6NSJ0 714 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 DPY19L3Q6ZPD9 716 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 STRADAQ7RTN6 431 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 PCDH20Q8N6Y1 951 aaKnown RBP23.06■■□□□ 1.28
VLDLR-201ENST00000382096 RXFP2Q8WXD0 754 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 GRAMD1AQ96CP6 724 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 VCPIP1Q96JH7 1222 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 SLC17A9Q9BYT1 436 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 RAB6CQ9H0N0 254 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 OSBPL2Q9H1P3 480 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 TNKS2Q9H2K2 1166 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 ATP13A1Q9HD20 1204 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 NLRC4Q9NPP4 1024 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 NCKIPSDQ9NZQ3 722 aa23.06■■□□□ 1.28
VLDLR-201ENST00000382096 CSNK1G3Q9Y6M4 447 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms