RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SLC4A5Q9BY07 1137 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 PRDM16Q9HAZ2 1276 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 RABGEF1Q9UJ41 708 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 SLC25A13Q9UJS0 675 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 MYH2Q9UKX2 1941 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 SOWAHBA6NEL2 793 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 RTN3O95197 1032 aaPredicted RBP17.32■□□□□ 0.36
SGCB-201ENST00000381431 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
SGCB-201ENST00000381431 BCL2L1Q07817 233 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 PLD1Q13393 1074 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 TEX44Q53QW1 395 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 ARMC12Q5T9G4 340 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 DLK2Q6UY11 383 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 ZBTB46Q86UZ6 589 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 HERC6Q8IVU3 1022 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 TMEM192Q8IY95 271 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 FAM9CQ8IZT9 166 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 ZYG11BQ9C0D3 744 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 OSGEPL1Q9H4B0 414 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 ARL15Q9NXU5 204 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 EGFL7Q9UHF1 273 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 COL1A1P02452 1464 aaPredicted RBP17.32■□□□□ 0.36
SGCB-201ENST00000381431 SNED1Q8TER0 1413 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 KAT6AQ92794 2004 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
SGCB-201ENST00000381431 CLCN5P51795 746 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 HPCAP84074 193 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 PDK3Q15120 406 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 ZNF621Q6ZSS3 439 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 HPS6Q86YV9 775 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 ZDHHC13Q8IUH4 622 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 PLEKHO2Q8TD55 490 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 MRPL57Q9BQC6 102 aaKnown RBP17.32■□□□□ 0.36
SGCB-201ENST00000381431 OPTCQ9UBM4 332 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 PCDH19Q8TAB3 1148 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 KCTD15Q96SI1 283 aaPredicted RBP17.32■□□□□ 0.36
SGCB-201ENST00000381431 EMILIN2Q9BXX0 1053 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 DPEP3Q9H4B8 488 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 RHOJQ9H4E5 214 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 CHKBQ9Y259 395 aa17.32■□□□□ 0.36
SGCB-201ENST00000381431 NTRK1P04629 796 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 SEMA5AQ13591 1074 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 DUSP28Q4G0W2 176 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 STXBP5Q5T5C0 1151 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 LPCAT4Q643R3 524 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 PRMT9Q6P2P2 845 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 SIAH1Q8IUQ4 282 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 CCDC185Q8N715 623 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 ZFP14Q9HCL3 533 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 MANSC4A6NHS7 340 aaPredicted RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 NT5C1B-RDH14C9J2C7 533 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 DHX15O43143 795 aaKnown RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 ARHGEF9O43307 516 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 SNUPNO95149 360 aaKnown RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 OR4Q2P0C623 313 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 ETS2P15036 469 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 ALDH9A1P49189 494 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 RABGGTBP53611 331 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 CRYBB1P53674 252 aaPredicted RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 CYP1B1Q16678 543 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 VSTM1Q6UX27 236 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 DLG3Q92796 817 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 TMEM159Q96B96 161 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 ERLEC1Q96DZ1 483 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 NPAS2Q99743 824 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 C1orf50Q9BV19 199 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 TMCC3Q9ULS5 477 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 VWA7Q9Y334 891 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 TREHO43280 583 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 PAGE1O75459 146 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 HOXB8P17481 243 aaPredicted RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 SP100P23497 879 aaPredicted RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 GSTT1P30711 240 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 TUFMP49411 452 aaKnown RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 DEFA1P59665 94 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 DEFA3P59666 94 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 KLF10Q13118 480 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 SLC26A9Q7LBE3 791 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 GLIS1Q8NBF1 620 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 ASB8Q9H765 288 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 ARHGEF4Q9NR80 690 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 USE1Q9NZ43 259 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 COPG2Q9UBF2 871 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 LGALS13Q9UHV8 139 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 C2CD4BA6NLJ0 364 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 GSTM1P09488 218 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 S100A3P33764 101 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 CRHR1P34998 444 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 GALNT3Q14435 633 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 TRMT11Q7Z4G4 463 aaKnown RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.31■□□□□ 0.36
SGCB-201ENST00000381431 SPATA22Q8NHS9 363 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 RP9Q8TA86 221 aaKnown RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 TPD52L3Q96J77 140 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 ZFYVE19Q96K21 471 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 C9orf16Q9BUW7 83 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 AAASQ9NRG9 546 aa17.31■□□□□ 0.36
SGCB-201ENST00000381431 CDV3Q9UKY7 258 aaKnown RBP17.31■□□□□ 0.36
SGCB-201ENST00000381431 NDUFV1P49821 464 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms