RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SLC25A52Q3SY17 297 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 OTUD1Q5VV17 481 aaPredicted RBP16.29■□□□□ 0.2
VCX3A-201ENST00000381089 ZNF683Q8IZ20 524 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 RYBPQ8N488 228 aaPredicted RBP16.29■□□□□ 0.2
VCX3A-201ENST00000381089 MSANTD4Q8NCY6 345 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 DENND6BQ8NEG7 585 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 OR7D4Q8NG98 312 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 NAT6Q93015 286 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 NT5C3BQ969T7 300 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 HAPLN3Q96S86 360 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 ZYG11BQ9C0D3 744 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 ZDHHC6Q9H6R6 413 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 PCDHGA8Q9Y5G5 932 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 EME2A4GXA9 379 aaPredicted RBP16.28■□□□□ 0.2
VCX3A-201ENST00000381089 MLLT3P42568 568 aaPredicted RBP16.28■□□□□ 0.2
VCX3A-201ENST00000381089 DEFB133Q30KQ1 61 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 FAM102AQ5T9C2 384 aaPredicted RBP16.28■□□□□ 0.2
VCX3A-201ENST00000381089 GUSBP11Q6P575 273 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 SNRNP27Q8WVK2 155 aaKnown RBP16.28■□□□□ 0.2
VCX3A-201ENST00000381089 ASB12Q8WXK4 309 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 C18orf8Q96DM3 657 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 ATXN7L3BQ96GX2 97 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 TBCBQ99426 244 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.28■□□□□ 0.2
VCX3A-201ENST00000381089 RWDD2AQ9UIY3 292 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 SNX10Q9Y5X0 201 aa16.28■□□□□ 0.2
VCX3A-201ENST00000381089 CXorf51AA0A1B0GTR3 108 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 IGLON5A6NGN9 336 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 RNF103O00237 685 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 RAD51BO15315 384 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 ZNF821O75541 412 aaPredicted RBP16.27■□□□□ 0.2
VCX3A-201ENST00000381089 C6P13671 934 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 PON1P27169 355 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 GNA12Q03113 381 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 FGL2Q14314 439 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 POLD3Q15054 466 aaPredicted RBP16.27■□□□□ 0.2
VCX3A-201ENST00000381089 FOXR1Q6PIV2 292 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 PARS2Q7L3T8 475 aaKnown RBP16.27■□□□□ 0.2
VCX3A-201ENST00000381089 SLC47A2Q86VL8 602 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 PLPP6Q8IY26 295 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 WDR36Q8NI36 951 aaKnown RBP16.27■□□□□ 0.2
VCX3A-201ENST00000381089 ISG20Q96AZ6 181 aaKnown RBP16.27■□□□□ 0.2
VCX3A-201ENST00000381089 C1QTNF7Q9BXJ2 289 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 C1QTNF2Q9BXJ5 285 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 SLC13A1Q9BZW2 595 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 PLCB1Q9NQ66 1216 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 ANLNQ9NQW6 1124 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 APOBEC3BQ9UH17 382 aaKnown RBP16.27■□□□□ 0.2
VCX3A-201ENST00000381089 DNAJC12Q9UKB3 198 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 HPCAL4Q9UM19 191 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 FCF1Q9Y324 198 aaKnown RBP16.27■□□□□ 0.2
VCX3A-201ENST00000381089 ENTPD2Q9Y5L3 495 aa16.27■□□□□ 0.2
VCX3A-201ENST00000381089 B8ZZF3 427 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 MUSKO15146 869 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 ANXA6P08133 673 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 TFE3P19532 575 aaPredicted RBP16.26■□□□□ 0.19
VCX3A-201ENST00000381089 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
VCX3A-201ENST00000381089 ARF5P84085 180 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 APBA1Q02410 837 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 SPIDRQ14159 915 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 ZNF805Q5CZA5 627 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 PRRT3Q5FWE3 981 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 ESRP1Q6NXG1 681 aaKnown RBP16.26■□□□□ 0.19
VCX3A-201ENST00000381089 CCDC81Q6ZN84 652 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 DRC7Q8IY82 874 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 TBATAQ96M53 351 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 GBP4Q96PP9 640 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 BOCQ9BWV1 1114 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 OSBPL1AQ9BXW6 950 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 TM6SF2Q9BZW4 377 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 RETREG1Q9H6L5 497 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 CAAP1Q9H8G2 361 aa16.26■□□□□ 0.19
VCX3A-201ENST00000381089 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
VCX3A-201ENST00000381089 CCDC187A0A096LP49 1063 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 C16orf96A6NNT2 1141 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 I6L893 689 aaPredicted RBP16.25■□□□□ 0.19
VCX3A-201ENST00000381089 K7ENP7 123 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 FOXN3O00409 490 aaPredicted RBP16.25■□□□□ 0.19
VCX3A-201ENST00000381089 TOR1BO14657 336 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 CLCN1P35523 988 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 GABRB2P47870 512 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 PFN3P60673 137 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 SNRPD1P62314 119 aaKnown RBP16.25■□□□□ 0.19
VCX3A-201ENST00000381089 YPEL5P62699 121 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 LY6DQ14210 128 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 TPD52L1Q16890 204 aaPredicted RBP16.25■□□□□ 0.19
VCX3A-201ENST00000381089 ARL13BQ3SXY8 428 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 C6orf132Q5T0Z8 1188 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 INO80CQ6PI98 192 aaPredicted RBP16.25■□□□□ 0.19
VCX3A-201ENST00000381089 PHACTR4Q8IZ21 702 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 SCG3Q8WXD2 468 aaKnown RBP16.25■□□□□ 0.19
VCX3A-201ENST00000381089 TTC9Q92623 222 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 MED8Q96G25 268 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 KLF6Q99612 283 aaPredicted RBP16.25■□□□□ 0.19
VCX3A-201ENST00000381089 SYNDIG1Q9H7V2 258 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 KLF15Q9UIH9 416 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 DOLKQ9UPQ8 538 aa16.25■□□□□ 0.19
VCX3A-201ENST00000381089 DOCK4Q8N1I0 1966 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms