RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 GKP32189 559 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 CD68P34810 354 aaPredicted RBP19.06■□□□□ 0.64
SMN2-202ENST00000380742 RECQLP46063 649 aaPredicted RBP19.06■□□□□ 0.64
SMN2-202ENST00000380742 CSNK1DP48730 415 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 SCNN1BP51168 640 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 COPAP53621 1224 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 ITKQ08881 620 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 TUBB2AQ13885 445 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 STARD3Q14849 445 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 KCTD19Q17RG1 926 aaPredicted RBP19.06■□□□□ 0.64
SMN2-202ENST00000380742 WHAMMP3Q1A5X7 153 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 MYLK3Q32MK0 819 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 ANKRD20A2Q5SQ80 823 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 ANKRD20A1Q5TYW2 823 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 ANKRD20A3Q5VUR7 823 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 ALG1LQ6GMV1 187 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 CCDC137Q6PK04 289 aaKnown RBP19.06■□□□□ 0.64
SMN2-202ENST00000380742 PID1Q7Z2X4 250 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 ZNF572Q7Z3I7 529 aaPredicted RBP19.06■□□□□ 0.64
SMN2-202ENST00000380742 SRLQ86TD4 932 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 PRUNE1Q86TP1 453 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 RYBPQ8N488 228 aaPredicted RBP19.06■□□□□ 0.64
SMN2-202ENST00000380742 FBXL6Q8N531 539 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 GLIS1Q8NBF1 620 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 SPATA4Q8NEY3 305 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 CCDC110Q8TBZ0 833 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 FERMT1Q9BQL6 677 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 TUBB2BQ9BVA1 445 aa19.06■□□□□ 0.64
SMN2-202ENST00000380742 KLHL8Q9P2G9 620 aaPredicted RBP19.06■□□□□ 0.64
SMN2-202ENST00000380742 C5orf60A6NFR6 353 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 CCDC188H7C350 402 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 ZNF189O75820 626 aaPredicted RBP19.05■□□□□ 0.64
SMN2-202ENST00000380742 CTSLP07711 333 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 ETS1P14921 441 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 CHRNA3P32297 505 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 DSC2Q02487 901 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 NIPAL4Q0D2K0 466 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 ELAVL3Q14576 367 aaKnown RBP19.05■□□□□ 0.64
SMN2-202ENST00000380742 IHHQ14623 411 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMN2-202ENST00000380742 OR2T3Q8NH03 318 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 ATL2Q8NHH9 583 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 ARRDC2Q8TBH0 407 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 CCDC114Q96M63 670 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 SPATA13Q96N96 652 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 NUDCD1Q96RS6 583 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 SEMA3CQ99985 751 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 IER2Q9BTL4 223 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 POLR1EQ9GZS1 481 aaKnown RBP19.05■□□□□ 0.64
SMN2-202ENST00000380742 NOD2Q9HC29 1040 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 GLOD4Q9HC38 313 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 TRHDEQ9UKU6 1024 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 WASF2Q9Y6W5 498 aa19.05■□□□□ 0.64
SMN2-202ENST00000380742 GCATO75600 419 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 STK10O94804 968 aaKnown RBP19.04■□□□□ 0.64
SMN2-202ENST00000380742 POP4O95707 220 aaKnown RBP19.04■□□□□ 0.64
SMN2-202ENST00000380742 NFKB1P19838 968 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 FNTAP49354 379 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 SATB1Q01826 763 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 CKAP4Q07065 602 aaKnown RBP19.04■□□□□ 0.64
SMN2-202ENST00000380742 C2orf54Q08AI8 447 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 DNTTIP2Q5QJE6 756 aaKnown RBP19.04■□□□□ 0.64
SMN2-202ENST00000380742 NCEH1Q6PIU2 408 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 MAMSTRQ6ZN01 415 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 KLHL7Q8IXQ5 586 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 OR8D1Q8WZ84 308 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 HEPHQ9BQS7 1158 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 MKRN2Q9H000 416 aaKnown RBP19.04■□□□□ 0.64
SMN2-202ENST00000380742 SLC6A17Q9H1V8 727 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 RSPH9Q9H1X1 276 aaPredicted RBP19.04■□□□□ 0.64
SMN2-202ENST00000380742 ZDHHC6Q9H6R6 413 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 SCUBE2Q9NQ36 999 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 EML5Q05BV3 1969 aa19.04■□□□□ 0.64
SMN2-202ENST00000380742 CACNA1IQ9P0X4 2223 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 TCRBV21S2A2A0A5A6 115 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 ALOX15BO15296 676 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 OPHN1O60890 802 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 IFNB1P01574 187 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 MMP2P08253 660 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 ZSCAN5DPP0CG00 497 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 DGKEP52429 567 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 P3H1Q32P28 736 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 ARSIQ5FYB1 569 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 GSTA5Q7RTV2 222 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 MMAAQ8IVH4 418 aaKnown RBP19.03■□□□□ 0.64
SMN2-202ENST00000380742 GRIN3AQ8TCU5 1115 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 IMP4Q96G21 291 aaKnown RBP19.03■□□□□ 0.64
SMN2-202ENST00000380742 CPEB1Q9BZB8 566 aaKnown RBP19.03■□□□□ 0.64
SMN2-202ENST00000380742 SLC25A51Q9H1U9 297 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 POLMQ9NP87 494 aaPredicted RBP19.03■□□□□ 0.64
SMN2-202ENST00000380742 HAUS2Q9NVX0 235 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 IL36AQ9UHA7 158 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 PCYOX1Q9UHG3 505 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 SARDHQ9UL12 918 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 PPM1HQ9ULR3 514 aa19.03■□□□□ 0.64
SMN2-202ENST00000380742 FARP1Q9Y4F1 1045 aaPredicted RBP19.03■□□□□ 0.64
SMN2-202ENST00000380742 F5H423 210 aaPredicted RBP19.02■□□□□ 0.64
SMN2-202ENST00000380742 LEFTY1O75610 366 aa19.02■□□□□ 0.64
SMN2-202ENST00000380742 GABRG2P18507 467 aa19.02■□□□□ 0.64
SMN2-202ENST00000380742 PTGIRP43119 386 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms