RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TACR2P21452 398 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 HARS2P49590 506 aaKnown RBP23.4■■□□□ 1.34
VPS16-201ENST00000380443 SERPINH1P50454 418 aaKnown RBP23.4■■□□□ 1.34
VPS16-201ENST00000380443 TCTN1Q2MV58 587 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 CES4AQ5XG92 561 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 CMC1Q7Z7K0 106 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 KIF2BQ8N4N8 673 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 TANC1Q9C0D5 1861 aa23.4■■□□□ 1.34
VPS16-201ENST00000380443 CARNS1A5YM72 827 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 NT5C1B-RDH14C9J2C7 533 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 F5H5T6 163 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 PQBP1O60828 265 aaKnown RBP23.39■■□□□ 1.33
VPS16-201ENST00000380443 CRABP2P29373 138 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 IRX4P78413 519 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 SLC12A1Q13621 1099 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 TAS1R1Q7RTX1 841 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 GALNT7Q86SF2 657 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 C10orf107Q8IVU9 208 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 LMNTD2Q8IXW0 634 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 RNF168Q8IYW5 571 aaPredicted RBP23.39■■□□□ 1.33
VPS16-201ENST00000380443 ZNF778Q96MU6 729 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 NMRAL1Q9HBL8 299 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 NOD2Q9HC29 1040 aa23.39■■□□□ 1.33
VPS16-201ENST00000380443 AFF4Q9UHB7 1163 aaKnown RBP23.39■■□□□ 1.33
VPS16-201ENST00000380443 MAGED2Q9UNF1 606 aaPredicted RBP23.39■■□□□ 1.33
VPS16-201ENST00000380443 J3KR12 359 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 FCHO1O14526 889 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 VAPBO95292 243 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 MYL4P12829 197 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 ATF6P18850 670 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 SLC11A2P49281 568 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 GRM3Q14832 879 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 SLC14A2Q15849 920 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 TMCO4Q5TGY1 634 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 ESRP1Q6NXG1 681 aaKnown RBP23.38■■□□□ 1.33
VPS16-201ENST00000380443 C2CD4AQ8NCU7 369 aaPredicted RBP23.38■■□□□ 1.33
VPS16-201ENST00000380443 PTCD3Q96EY7 689 aaKnown RBP23.38■■□□□ 1.33
VPS16-201ENST00000380443 SLC39A10Q9ULF5 831 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 TRIM33Q9UPN9 1127 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 ACSL4O60488 711 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 PRAMEF11O60813 436 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 EPOP01588 193 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 AHSGP02765 367 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 KCNA4P22459 653 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 OR1E1P30953 314 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 AQP5P55064 265 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 ABCE1P61221 599 aaKnown RBP23.38■■□□□ 1.33
VPS16-201ENST00000380443 ITKQ08881 620 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 SLC10A7Q0GE19 358 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 USP10Q14694 798 aaKnown RBP23.38■■□□□ 1.33
VPS16-201ENST00000380443 TPGS2Q68CL5 300 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 BBS5Q8N3I7 341 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.38■■□□□ 1.33
VPS16-201ENST00000380443 GIPC2Q8TF65 315 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 PEX13Q92968 403 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 PSMG2Q969U7 264 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 PLD4Q96BZ4 506 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 PABPC5Q96DU9 382 aaKnown RBP23.38■■□□□ 1.33
VPS16-201ENST00000380443 MAGEH1Q9H213 219 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 CCSER2Q9H7U1 834 aa23.38■■□□□ 1.33
VPS16-201ENST00000380443 CBX6O95503 412 aa23.37■■□□□ 1.33
VPS16-201ENST00000380443 SERPINA6P08185 405 aa23.37■■□□□ 1.33
VPS16-201ENST00000380443 MNAT1P51948 309 aa23.37■■□□□ 1.33
VPS16-201ENST00000380443 LBRQ14739 615 aaKnown RBP23.37■■□□□ 1.33
VPS16-201ENST00000380443 PRSS55Q6UWB4 352 aaPredicted RBP23.37■■□□□ 1.33
VPS16-201ENST00000380443 TMEM173Q86WV6 379 aaPredicted RBP23.37■■□□□ 1.33
VPS16-201ENST00000380443 BCL7CQ8WUZ0 217 aaPredicted RBP23.37■■□□□ 1.33
VPS16-201ENST00000380443 ATXN7L3BQ96GX2 97 aa23.37■■□□□ 1.33
VPS16-201ENST00000380443 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.37■■□□□ 1.33
VPS16-201ENST00000380443 BAIAP2L1Q9UHR4 511 aa23.37■■□□□ 1.33
VPS16-201ENST00000380443 TRIM13O60858 407 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 HMBSP08397 361 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 ALOX15P16050 662 aaPredicted RBP23.36■■□□□ 1.33
VPS16-201ENST00000380443 CD86P42081 329 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 PPP3CCP48454 512 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 CD151P48509 253 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 KPNA2P52292 529 aaKnown RBP23.36■■□□□ 1.33
VPS16-201ENST00000380443 HK2P52789 917 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 IKBKEQ14164 716 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 TSNAXIP1Q2TAA8 658 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 RABGAP1LQ5R372 815 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 HECTD3Q5T447 861 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 TSTD2Q5T7W7 516 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 ZCCHC23Q6ZST2 131 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 RAPH1Q70E73 1250 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 ZNF354CQ86Y25 554 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 SCLYQ96I15 445 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 IGSF21Q96ID5 467 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 BTBD10Q9BSF8 475 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 TBC1D10AQ9BXI6 508 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 C20orf27Q9GZN8 174 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 POLR1EQ9GZS1 481 aaKnown RBP23.36■■□□□ 1.33
VPS16-201ENST00000380443 DNAJC28Q9NX36 388 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 HCSTQ9UBK5 93 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 DNAJC16Q9Y2G8 782 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 PCDHB12Q9Y5F1 795 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 LOC285095A0A1B0GVY8 99 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 G3V2L1 256 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 MMP2P08253 660 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 ARNTP27540 789 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms