RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SCAIQ8N9R8 606 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 URGCPQ8TCY9 931 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 THAP11Q96EK4 314 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PLEKHA8Q96JA3 519 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 SLC45A3Q96JT2 553 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 RANBP9Q96S59 729 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PCDHAC1Q9H158 963 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 SACM1LQ9NTJ5 587 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 RAB26Q9ULW5 256 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 CDC14AQ9UNH5 594 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 VAPBO95292 243 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 EDNRBP24530 442 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ATICP31939 592 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 GARSP41250 739 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 GRIA4P48058 902 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 TKTL1P51854 596 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 TPI1P60174 286 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 MPP1Q00013 466 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 CTBSQ01459 385 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 BST2Q10589 180 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 RALGDSQ12967 914 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 SEMA5AQ13591 1074 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 BCL2A1Q16548 175 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 WSCD1Q658N2 575 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PLPPR4Q7Z2D5 763 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 LDB1Q86U70 411 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 FBXW8Q8N3Y1 598 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 BHLHE22Q8NFJ8 381 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PSMD13Q9UNM6 376 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ARID2Q68CP9 1835 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 TTC3P53804 2025 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 TTC24A2A3L6 582 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 A8MU76 341 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 EIF3FO00303 357 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 MDM4O15151 490 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 DYNC1LI2O43237 492 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 AOC1P19801 751 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 MS4A2Q01362 244 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 KCNMB4Q86W47 210 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 LILRA2Q8N149 483 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 LRRC39Q96DD0 335 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 PHF21BQ96EK2 531 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 TSNARE1Q96NA8 513 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 SLC39A3Q9BRY0 314 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 TRIM8Q9BZR9 551 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 GMPR2Q9P2T1 348 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 ZDHHC2Q9UIJ5 367 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 ITGB1BP2Q9UKP3 347 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 SPO11Q9Y5K1 396 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 HUS1O60921 280 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 TSHRP16473 764 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 PSMC3P17980 439 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 PIK3R1P27986 724 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 MAPK10P53779 464 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 NUP107P57740 925 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 GRIK4Q16099 956 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 ARHGAP36Q6ZRI8 547 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 ARCQ7LC44 396 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 APPL2Q8NEU8 664 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 BEST2Q8NFU1 509 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 DNAJB3Q8WWF6 145 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 EMID1Q96A84 441 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 C12orf43Q96C57 262 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 VPS39Q96JC1 886 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 ULBP1Q9BZM6 244 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 NOX1Q9Y5S8 564 aa12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-202ENST00000380281 YJEFN3A6XGL0 299 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 PSMD12O00232 456 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 TRIM13O60858 407 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ZNF23P17027 643 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 PRAMEP78395 509 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 INCA1Q0VD86 236 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 GK5Q6ZS86 529 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ALDH16A1Q8IZ83 802 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 NPWQ8N729 165 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 PPWD1Q96BP3 646 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 BIRC8Q96P09 236 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 RNF11Q9Y3C5 154 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 C9IYK1 514 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 SEC24DO94855 1032 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 FBXO21O94952 628 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 UGT1A6P19224 532 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 TPSB2P20231 275 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 CD247P20963 164 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 UGT1A1P22309 533 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms