RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ADAMTS19Q8TE59 1207 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 PTCD2Q8WV60 388 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 PTPRN2Q92932 1015 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 DDX50Q9BQ39 737 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 POLR1EQ9GZS1 481 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 MRM3Q9HC36 420 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 STOML2Q9UJZ1 356 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 STARD13Q9Y3M8 1113 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 OLFM2O95897 454 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 TOP3BO95985 862 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 RHOCP08134 193 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 GLDCP23378 1020 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 LIMK2P53671 638 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 PDE1CQ14123 709 aaPredicted RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 FSTL4Q6MZW2 842 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 UBE2Q1Q7Z7E8 422 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 SETD3Q86TU7 594 aaPredicted RBP20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 HS6ST3Q8IZP7 471 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 OTUD6BQ8N6M0 293 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 ARMC2Q8NEN0 867 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 ATP2A3Q93084 1043 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 ATXN7L3BQ96GX2 97 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 PRKAG3Q9UGI9 489 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 SLC2A6Q9UGQ3 507 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 TBC1D30Q9Y2I9 924 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 MYO7AQ13402 2215 aa20.1■□□□□ 0.81
PDLIM5-205ENST00000380180 ILVBLA1L0T0 632 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 KDELR3O43731 214 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 VAPBO95292 243 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 LRG1P02750 347 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 TYK2P29597 1187 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 SERPINH1P50454 418 aaKnown RBP20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 OXCT1P55809 520 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 ERVFC1P60507 584 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 CNGA3Q16281 694 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 CNPY4Q8N129 248 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 DCLK2Q8N568 766 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 CCDC63Q8NA47 563 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 CPQQ9Y646 472 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 GREM1O60565 184 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 CSPG5O95196 566 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 ADH1AP07327 375 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 C8AP07357 584 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 ABCG1P45844 678 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 ARCN1P48444 511 aaKnown RBP20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 CYP4F8P98187 520 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 MSLNQ13421 630 aaPredicted RBP20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 SEPT6Q14141 434 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 CCDC121Q6ZUS5 278 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 OTOAQ7RTW8 1153 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 RAD9AQ99638 391 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 TCF25Q9BQ70 676 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 MCMBPQ9BTE3 642 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 LRRC3Q9BY71 257 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 ZMYND15Q9H091 742 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 TREX1Q9NSU2 369 aa20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 MTO1Q9Y2Z2 717 aaKnown RBP20.09■□□□□ 0.81
PDLIM5-205ENST00000380180 LOC285095A0A1B0GVY8 99 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 LCHNA4D1U4 455 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 CCT8L1PA6NM43 557 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 NEFHP12036 1026 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 ARNTP27540 789 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 CSE1LP55060 971 aaKnown RBP20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 CORO7P57737 925 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 PPM1JQ5JR12 505 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 CCDC149Q6ZUS6 474 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 TMC8Q8IU68 726 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 MAB21L3Q8N8X9 362 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 KREMEN2Q8NCW0 462 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 CCT6BQ92526 530 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 THOC1Q96FV9 657 aaKnown RBP20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 UBA2Q9UBT2 640 aaPredicted RBP20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 ARL2BPQ9Y2Y0 163 aa20.08■□□□□ 0.8
PDLIM5-205ENST00000380180 LATS1O95835 1130 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 BGNP21810 368 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 SIRPB2Q5JXA9 342 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 RNF219Q5W0B1 726 aaPredicted RBP20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 CXorf57Q6NSI4 855 aaKnown RBP20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 TTC16Q8NEE8 873 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 MRPS31Q92665 395 aaKnown RBP20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 MECRQ9BV79 373 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 ACE2Q9BYF1 805 aaPredicted RBP20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 PRKD2Q9BZL6 878 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 SNX15Q9NRS6 342 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 NSMCE4AQ9NXX6 385 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 HEATR9A2RTY3 570 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 TBL1XO60907 577 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 ALG1LQ6GMV1 187 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 Q6ZNB5 142 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 CMC1Q7Z7K0 106 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 BBS5Q8N3I7 341 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 SP7Q8TDD2 431 aaPredicted RBP20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 ISL2Q96A47 359 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 RANBP9Q96S59 729 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 SEPT3Q9UH03 358 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 DCDC2Q9UHG0 476 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 BPTFQ12830 3046 aa20.07■□□□□ 0.8
PDLIM5-205ENST00000380180 PDE4DIPQ5VU43 2346 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 HIDE1A8MVS5 230 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 CBX4O00257 560 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms