RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 ATG16L1Q676U5 607 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 E2F7Q96AV8 911 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 CYP2S1Q96SQ9 504 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 SEMA3CQ99985 751 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 CAB39LQ9H9S4 337 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 PDFQ9HBH1 243 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 RXFP1Q9HBX9 757 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 ATP13A1Q9HD20 1204 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNX2-201ENST00000379516 SIRPGQ9P1W8 387 aa15.24■□□□□ 0.03
SNX2-201ENST00000379516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.23■□□□□ 0.03
SNX2-201ENST00000379516 H3BNC9 293 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 GJB3O75712 270 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 FGF18O76093 207 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 ZNF177Q13360 481 aaPredicted RBP15.23■□□□□ 0.03
SNX2-201ENST00000379516 CHI3L2Q15782 390 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 TMEM150AQ86TG1 271 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 C10orf82Q8WW14 230 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 PPM1EQ8WY54 764 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 ISL2Q96A47 359 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 VPS39Q96JC1 886 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 ZNF599Q96NL3 588 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 PRKD2Q9BZL6 878 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 ZNF334Q9HCZ1 680 aaPredicted RBP15.23■□□□□ 0.03
SNX2-201ENST00000379516 EMCNQ9ULC0 261 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 ACTL7AQ9Y615 435 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 HEATR9A2RTY3 570 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 H0YHG0 523 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 MUSKO15146 869 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 BIRC5O15392 142 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 PLIN3O60664 434 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 F11P03951 625 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 HOXD9P28356 352 aaPredicted RBP15.23■□□□□ 0.03
SNX2-201ENST00000379516 ALDH3A1P30838 453 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 GMPRP36959 345 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 MAGEA12P43365 314 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 ARCN1P48444 511 aaKnown RBP15.23■□□□□ 0.03
SNX2-201ENST00000379516 OXCT1P55809 520 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 THOC5Q13769 683 aaKnown RBP15.23■□□□□ 0.03
SNX2-201ENST00000379516 INSCQ1MX18 579 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 C16orf59Q7L2K0 433 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 GBP7Q8N8V2 638 aaPredicted RBP15.23■□□□□ 0.03
SNX2-201ENST00000379516 TADA1Q96BN2 335 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 MCMBPQ9BTE3 642 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 TRIM55Q9BYV6 548 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 IL23AQ9NPF7 189 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 TREX1Q9NSU2 369 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 DCTN4Q9UJW0 460 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 SLC12A4Q9UP95 1085 aa15.23■□□□□ 0.03
SNX2-201ENST00000379516 LILRB3O75022 631 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 AHSGP02765 367 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 MPOP05164 745 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 RHOCP08134 193 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 ARNTP27540 789 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 BST1Q10588 318 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 CTBP1Q13363 440 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 GRM3Q14832 879 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 DLG2Q15700 870 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 FASTKD1Q53R41 847 aaKnown RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 SIRPB2Q5JXA9 342 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 HERC6Q8IVU3 1022 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 DENND6AQ8IWF6 608 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 BBS5Q8N3I7 341 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 FIBCD1Q8N539 461 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 ACVR1CQ8NER5 493 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 RFWD2Q8NHY2 731 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 ZBP1Q9H171 429 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 TMEM216Q9P0N5 145 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 SLC39A10Q9ULF5 831 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 A0A096LPK6 155 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 A0A1B0GVM2 712 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 TCAF2A6NFQ2 919 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 SCAMP3O14828 347 aaKnown RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 GSRP00390 522 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 GSTA1P08263 222 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 CNPP09543 421 aaKnown RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 SAT1P21673 171 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 GLDCP23378 1020 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 SETDB1Q15047 1291 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 GALNTL6Q49A17 601 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 TXNDC8Q6A555 127 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 CHST9Q7L1S5 443 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 ZC3HC1Q86WB0 502 aaKnown RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 CNTN4Q8IWV2 1026 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 ARL14EPQ8N8R7 260 aaPredicted RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 PPP1R14CQ8TAE6 165 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 IFT43Q96FT9 208 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 SLC22A12Q96S37 553 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 DDX50Q9BQ39 737 aaKnown RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 RHOJQ9H4E5 214 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 ZNF358Q9NW07 568 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 UBA2Q9UBT2 640 aaPredicted RBP15.22■□□□□ 0.03
SNX2-201ENST00000379516 MAFFQ9ULX9 164 aa15.22■□□□□ 0.03
SNX2-201ENST00000379516 A0A0G2JND7 137 aa15.21■□□□□ 0.03
SNX2-201ENST00000379516 LOC285095A0A1B0GVY8 99 aa15.21■□□□□ 0.03
SNX2-201ENST00000379516 ILVBLA1L0T0 632 aa15.21■□□□□ 0.03
SNX2-201ENST00000379516 TGM5O43548 720 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 5620.5 ms