RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PCDHA11Q9Y5I1 949 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 DNAH14Q0VDD8 3507 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 ANKRD12Q6UB98 2062 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 AP2B1P63010 937 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 PTPRCAPQ14761 206 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 GPNMBQ14956 572 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 FYB2Q5VWT5 728 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 OTOP2Q7RTS6 562 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 DENND6AQ8IWF6 608 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 ZSCAN18Q8TBC5 510 aaPredicted RBP10.96□□□□□ -0.66
NEDD9-201ENST00000379433 DENND1AQ8TEH3 1009 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 NAT14Q8WUY8 206 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 ARNTL2Q8WYA1 636 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 PRR11Q96HE9 360 aaPredicted RBP10.96□□□□□ -0.66
NEDD9-201ENST00000379433 LRRC37BQ96QE4 947 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 SP110Q9HB58 689 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 TMEM161AQ9NX61 479 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 HMX2A2RU54 273 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 ZBBXA8MT70 800 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 A8MUI8 341 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 TEX28O15482 410 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 EOMESO95936 686 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 OR1E1P30953 314 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 GNALP38405 381 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 BFSP2Q13515 415 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 NFE2Q16621 373 aaPredicted RBP10.96□□□□□ -0.66
NEDD9-201ENST00000379433 PDK4Q16654 411 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 N4BP2L1Q5TBK1 243 aaPredicted RBP10.96□□□□□ -0.66
NEDD9-201ENST00000379433 HMCESQ96FZ2 354 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 NR1H4Q96RI1 486 aaPredicted RBP10.96□□□□□ -0.66
NEDD9-201ENST00000379433 MYLK2Q9H1R3 596 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 SENP1Q9P0U3 644 aa10.96□□□□□ -0.66
NEDD9-201ENST00000379433 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 ZWINTO95229 277 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 GALTP07902 379 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 CST5P28325 142 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-201ENST00000379433 CD86P42081 329 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 IRF9Q00978 393 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 SLC10A7Q0GE19 358 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 PAFAH1B3Q15102 231 aaKnown RBP10.95□□□□□ -0.66
NEDD9-201ENST00000379433 PLEKHG4Q58EX7 1191 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 PM20D1Q6GTS8 502 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 NEK5Q6P3R8 708 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 TTC7BQ86TV6 843 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 DENND1CQ8IV53 801 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 GALNT6Q8NCL4 622 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 OR6P1Q8NGX9 317 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 GLMNQ92990 594 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 IGSF8Q969P0 613 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 RTP4Q96DX8 246 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 CERS2Q96G23 380 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 APOPT1Q96IL0 206 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-201ENST00000379433 MTMR11A4FU01 709 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 HACD1B0YJ81 288 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 IFRD1O00458 451 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-201ENST00000379433 GJB5O95377 273 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 CYP11A1P05108 521 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 HLA-DQB2P05538 268 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 ACVRL1P37023 503 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 SCNN1AP37088 669 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 RPS24P62847 133 aaKnown RBP10.95□□□□□ -0.66
NEDD9-201ENST00000379433 DSC2Q02487 901 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 DSC1Q08554 894 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 FAPQ12884 760 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 PLD1Q13393 1074 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 PRPSAP1Q14558 356 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 MON1AQ86VX9 555 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 TDRPQ86YL5 185 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 MFN1Q8IWA4 741 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 C8orf48Q96LL4 319 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 SMIM14Q96QK8 99 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 SLC40A1Q9NP59 571 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 KANSL3Q9P2N6 904 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 TIMM22Q9Y584 194 aa10.95□□□□□ -0.66
NEDD9-201ENST00000379433 SF3B1O75533 1304 aaKnown RBP eCLIP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 SNX2O60749 519 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 RFPL1O75677 317 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 GLUD2P49448 558 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PPIDQ08752 370 aaKnown RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 TAF1BQ53T94 588 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 FAM219BQ5XKK7 198 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 ESRP1Q6NXG1 681 aaKnown RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 FBXL22Q6P050 247 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 LRRC8BQ6P9F7 803 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 FAM126BQ8IXS8 530 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 LGI2Q8N0V4 545 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 CASD1Q96PB1 797 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 FERD3LQ96RJ6 166 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 NDNQ99608 321 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 TTPALQ9BTX7 342 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 YIPF3Q9GZM5 350 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PRKAG2Q9UGJ0 569 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 A0A0D9SEW6 157 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 KCNU1A8MYU2 1149 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PRPF4O43172 522 aaKnown RBP eCLIP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms