RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 INIPQ9NRY2 104 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 AGPAT4Q9NRZ5 378 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 RIC8BQ9NVN3 520 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 GMIPQ9P107 970 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ABCD2Q9UBJ2 740 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 NXF1Q9UBU9 619 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 AP4E1Q9UPM8 1137 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 NDUFAF1Q9Y375 327 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 POM121CA8CG34 1229 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 BOLA2-SMG1P6H3BVE0 249 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 RNF103O00237 685 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 CAPGP40121 348 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 IGBP1P78318 339 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 GBE1Q04446 702 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 CBX2Q14781 532 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 NRF1Q16656 503 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 MTX3Q5HYI7 312 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ARHGAP17Q68EM7 881 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 REP15Q6BDI9 236 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 NXNQ6DKJ4 435 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 CNTN4Q8IWV2 1026 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 KLHDC8BQ8IXV7 354 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 CPXCR1Q8N123 301 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF786Q8N393 782 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 PAPD5Q8NDF8 572 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 GABPB2Q8TAK5 448 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 PTCD2Q8WV60 388 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 C17orf50Q8WW18 174 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 JDP2Q8WYK2 163 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 USP13Q92995 863 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 TMA16Q96EY4 203 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF347Q96SE7 839 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 MRPL57Q9BQC6 102 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 MROQ9BYG7 248 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 SELENONQ9NZV5 590 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 EBF1Q9UH73 591 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 SIX4Q9UIU6 781 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 IGKV6-21A0A0C4DH24 114 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZCWPW2A0A1B0GU75 182 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TCP10L2B9ZVM9 353 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 E7ENX8 843 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 VWA5AO00534 786 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 NRP2O60462 931 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 CLPXO76031 633 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 RGS20O76081 388 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 BCL10O95999 233 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 EDN1P05305 212 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PTPN2P17706 415 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 UGT1A6P19224 532 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 UGT1A1P22309 533 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 UGT1A4P22310 534 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ATP5F1P24539 256 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PSMA4P25789 261 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 UGT1A3P35503 534 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 UGT1A5P35504 534 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 MRPL19P49406 292 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SESN2P58004 480 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF33AQ06730 810 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 EPS8Q12929 822 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 RBM48Q5RL73 367 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ATF7IP2Q5U623 682 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ANKRD26P1Q6NSI1 321 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 HMBOX1Q6NT76 420 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF773Q6PK81 442 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 USP51Q70EK9 711 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PTF1AQ7RTS3 328 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 CYP2U1Q7Z449 544 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 LINC00523Q86TU6 105 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 UNC93AQ86WB7 457 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 LSMEM2Q8N112 164 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 MYO1HQ8N1T3 1032 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PLD6Q8N2A8 252 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TMEM151AQ8N4L1 468 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 DHRSXQ8N5I4 330 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 MINDY1Q8N5J2 469 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 OR13F1Q8NGS4 319 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 CASP10Q92851 521 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 POP5Q969H6 163 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PGBD4Q96DM1 585 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 VPS39Q96JC1 886 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SNX27Q96L92 541 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SLC29A1Q99808 456 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 MRPL46Q9H2W6 279 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TASP1Q9H6P5 420 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ACTR3BQ9P1U1 418 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZDHHC2Q9UIJ5 367 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 VANGL2Q9ULK5 521 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ADAMTS5Q9UNA0 930 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ACOT9Q9Y305 439 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PHIPQ8WWQ0 1821 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SAC3D1A6NKF1 404 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 C16orf96A6NNT2 1141 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF839A8K0R7 811 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 MRASO14807 208 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 UBDO15205 165 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SEC14L2O76054 403 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ATE1O95260 518 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ERVK-10P10266 1014 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 HOXB6P17509 224 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms