RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CHRAC1Q9NRG0 131 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 SLC17A7Q9P2U7 560 aa19.7■□□□□ 0.74
SSU72-204ENST00000378726 AGO1Q9UL18 857 aaKnown RBP19.7■□□□□ 0.74
SSU72-204ENST00000378726 EIF4E1BA6NMX2 242 aaKnown RBP19.69■□□□□ 0.74
SSU72-204ENST00000378726 TRAFD1O14545 582 aaPredicted RBP19.69■□□□□ 0.74
SSU72-204ENST00000378726 RPS24P62847 133 aaKnown RBP19.69■□□□□ 0.74
SSU72-204ENST00000378726 IL10RBQ08334 325 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 CTC1Q2NKJ3 1217 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 PABPC1LQ4VXU2 614 aaKnown RBP19.69■□□□□ 0.74
SSU72-204ENST00000378726 RABGAP1LQ5R372 815 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 SH2D5Q6ZV89 423 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 ZNF669Q96BR6 464 aaPredicted RBP19.69■□□□□ 0.74
SSU72-204ENST00000378726 DENND2DQ9H6A0 471 aaPredicted RBP19.69■□□□□ 0.74
SSU72-204ENST00000378726 TRPC7Q9HCX4 862 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 ALG13Q9NP73 1137 aaKnown RBP19.69■□□□□ 0.74
SSU72-204ENST00000378726 SMPD4Q9NXE4 827 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 IL1RAPL1Q9NZN1 696 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 LRRC42Q9Y546 428 aa19.69■□□□□ 0.74
SSU72-204ENST00000378726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.68■□□□□ 0.74
SSU72-204ENST00000378726 FAM237BA0A1B0GVD1 139 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ENTPD5O75356 428 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 USP1O94782 785 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ERVK-10P10266 1014 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MBL2P11226 248 aaPredicted RBP19.68■□□□□ 0.74
SSU72-204ENST00000378726 CALRP27797 417 aaKnown RBP19.68■□□□□ 0.74
SSU72-204ENST00000378726 NUMBP49757 651 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 SERPINB9P50453 376 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 CDH4P55283 916 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MAXP61244 160 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 SLC18A2Q05940 514 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 NIPAL4Q0D2K0 466 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 BLMHQ13867 455 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ANKRD20A4Q4UJ75 823 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ADGRF1Q5T601 910 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 FYB2Q5VWT5 728 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 KDELC2Q7Z4H8 507 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 TEX26Q8N6G2 289 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MICAL1Q8TDZ2 1067 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 SPDL1Q96EA4 605 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MFSD3Q96ES6 412 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 RAD9AQ99638 391 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 FICDQ9BVA6 458 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ENTPD7Q9NQZ7 604 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 H0Y3Z8 333 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 PTPN4P29074 926 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ADRA1AP35348 466 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 RASSF2P50749 326 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 BMPR2Q13873 1038 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 SMAD1Q15797 465 aaKnown RBP19.68■□□□□ 0.74
SSU72-204ENST00000378726 SEPT7Q16181 437 aaKnown RBP19.68■□□□□ 0.74
SSU72-204ENST00000378726 WASHC2DQ5SRD0 308 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MROH9Q5TGP6 573 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 TXNDC8Q6A555 127 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 TRIM68Q6AZZ1 485 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 DENND5AQ6IQ26 1287 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MARK2Q7KZI7 788 aaKnown RBP19.68■□□□□ 0.74
SSU72-204ENST00000378726 CLNKQ7Z7G1 428 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ENDOVQ8N8Q3 282 aaKnown RBP19.68■□□□□ 0.74
SSU72-204ENST00000378726 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.68■□□□□ 0.74
SSU72-204ENST00000378726 PTPRN2Q92932 1015 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MTBPQ96DY7 904 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 CERS2Q96G23 380 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MRGPRX2Q96LB1 330 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 SLC22A12Q96S37 553 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 MIPEPQ99797 713 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 RETREG1Q9H6L5 497 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 IL21Q9HBE4 155 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 SLC17A6Q9P2U8 582 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 ASB3Q9Y575 518 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 PTPRSQ13332 1948 aa19.68■□□□□ 0.74
SSU72-204ENST00000378726 A0A0D9SEW6 157 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 ZCWPW2A0A1B0GU75 182 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 SPDYAQ5MJ70 313 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 LILRA6Q6PI73 481 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 HERC6Q8IVU3 1022 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 FSD1LQ9BXM9 530 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 ZFATQ9P243 1243 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 LNPEPQ9UIQ6 1025 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 SOX13Q9UN79 622 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 HMX2A2RU54 273 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 H3BNC9 293 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 TSPAN3O60637 253 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 LPXNO60711 386 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 HDCP19113 662 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 ETFBP38117 255 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 IRX1P78414 480 aaPredicted RBP19.67■□□□□ 0.74
SSU72-204ENST00000378726 SMAD3P84022 425 aaKnown RBP19.67■□□□□ 0.74
SSU72-204ENST00000378726 MPP3Q13368 585 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 RANBP10Q6VN20 620 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 ARL14EPQ8N8R7 260 aaPredicted RBP19.67■□□□□ 0.74
SSU72-204ENST00000378726 IMP4Q96G21 291 aaKnown RBP19.67■□□□□ 0.74
SSU72-204ENST00000378726 PRICKLE1Q96MT3 831 aaPredicted RBP19.67■□□□□ 0.74
SSU72-204ENST00000378726 ANKRD27Q96NW4 1050 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 MAGEH1Q9H213 219 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 ATXN3LQ9H3M9 355 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 TLE6Q9H808 572 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 SLC24A3Q9HC58 644 aa19.67■□□□□ 0.74
SSU72-204ENST00000378726 LCHNA4D1U4 455 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 PRAMEF11O60813 436 aa19.66■□□□□ 0.74
SSU72-204ENST00000378726 CLDN11O75508 207 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms