RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LMNAP02545 664 aaKnown RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 APOC2P02655 101 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 DYNLT1P63172 113 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 SLC10A7Q0GE19 358 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 ZNF235Q14590 738 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 RPS6KA1Q15418 735 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 PLK5Q496M5 336 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 ARSIQ5FYB1 569 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 RALGPS1Q5JS13 557 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 PRR23BQ6ZRT6 265 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 CCDC13Q8IYE1 715 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 SUMF1Q8NBK3 374 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 CCNYQ8ND76 341 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 GANCQ8TET4 914 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 TOE1Q96GM8 510 aaKnown RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 BTBD1Q9H0C5 482 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 DUSP15Q9H1R2 295 aaPredicted RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 ZDHHC6Q9H6R6 413 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 DYRK4Q9NR20 520 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 SMG5Q9UPR3 1016 aaKnown RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 INVSQ9Y283 1065 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 SHROOM3Q8TF72 1996 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 A0A1W2PP55 124 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 KRIT1O00522 736 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 RNASEH2AO75792 299 aaKnown RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 MMP13P45452 471 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 ATXN7L2Q5T6C5 722 aaPredicted RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 PMS2CLQ68D20 193 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 LAIR1Q6GTX8 287 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 SRLQ86TD4 932 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 HDDC3Q8N4P3 179 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 AADATQ8N5Z0 425 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 FAM160A2Q8N612 972 aaPredicted RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 TSEN2Q8NCE0 465 aaKnown RBP13.43□□□□□ -0.26
CKAP2-202ENST00000378034 CADM4Q8NFZ8 388 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 GRIN3AQ8TCU5 1115 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 HCAR2Q8TDS4 363 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 TUBGCP5Q96RT8 1024 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 HEMGNQ9BXL5 484 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 HDAC8Q9BY41 377 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 KDM4CQ9H3R0 1056 aa13.43□□□□□ -0.26
CKAP2-202ENST00000378034 KPNA3O00505 521 aaPredicted RBP13.42□□□□□ -0.26
CKAP2-202ENST00000378034 MAP3K6O95382 1288 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 CCNB1P14635 433 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 BCKDHBP21953 392 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 CES1P23141 567 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 ITGB7P26010 798 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 MSNP26038 577 aaKnown RBP13.42□□□□□ -0.26
CKAP2-202ENST00000378034 DRD3P35462 400 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
CKAP2-202ENST00000378034 AP1S1P61966 158 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 RPL6Q02878 288 aaKnown RBP13.42□□□□□ -0.26
CKAP2-202ENST00000378034 ADCY2Q08462 1091 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 XRCC4Q13426 336 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 CCDC181Q5TID7 509 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 NPNTQ6UXI9 565 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 GDPD4Q6W3E5 623 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 FRMD1Q8N878 549 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 FOXJ1Q92949 421 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 ZNF641Q96N77 438 aaPredicted RBP13.42□□□□□ -0.26
CKAP2-202ENST00000378034 MGME1Q9BQP7 344 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 NEUROG2Q9H2A3 272 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 CD93Q9NPY3 652 aa13.42□□□□□ -0.26
CKAP2-202ENST00000378034 EVLQ9UI08 416 aaPredicted RBP13.42□□□□□ -0.26
CKAP2-202ENST00000378034 TPX2Q9ULW0 747 aaKnown RBP13.42□□□□□ -0.26
CKAP2-202ENST00000378034 HACD1B0YJ81 288 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 MTSS1O43312 755 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 DPP6P42658 865 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 ZNF805Q5CZA5 627 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 TTC13Q8NBP0 860 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 TFB1MQ8WVM0 346 aaKnown RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 ZNF419Q96HQ0 510 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 NUDCD1Q96RS6 583 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 LGMNQ99538 433 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 CARD9Q9H257 536 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 DKK3Q9UBP4 350 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 SPAG17Q6Q759 2223 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 CEP192Q8TEP8 1941 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 LRRC72A6NJI9 287 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 NEBLO76041 1014 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 SEMA4FO95754 770 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 PECAM1P16284 738 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 CR2P20023 1033 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 SUOXP51687 545 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 AP1B1Q10567 949 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 CNTN1Q12860 1018 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 PRKD1Q15139 912 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 LLGL1Q15334 1064 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 SEL1L2Q5TEA6 688 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 DCAF12L1Q5VU92 463 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 ERN2Q76MJ5 926 aaKnown RBP13.41□□□□□ -0.26
CKAP2-202ENST00000378034 FAM124AQ86V42 546 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 OR6K2Q8NGY2 324 aa13.41□□□□□ -0.26
CKAP2-202ENST00000378034 RAB7BQ96AH8 199 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms