RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 TRIM32Q13049 653 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ARL13BQ3SXY8 428 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 HSP90AA5PQ58FG0 334 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 MBLAC2Q68D91 279 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 PM20D1Q6GTS8 502 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 FAM171BQ6P995 826 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 PDZD4Q76G19 769 aaPredicted RBP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 MRPL10Q7Z7H8 261 aaKnown RBP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 CMC1Q7Z7K0 106 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 GALNT4Q8N4A0 578 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 OR10T2Q8NGX3 314 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 FNDC8Q8TC99 324 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 TRIB2Q92519 343 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 BTBD9Q96Q07 612 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 MRPS26Q9BYN8 205 aaKnown RBP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ZCWPW2A0A1B0GU75 182 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 PLIN3O60664 434 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 CYBAP13498 195 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 TPH1P17752 444 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 NELFEP18615 380 aaKnown RBP17.38■□□□□ 0.37
TRIM27-201ENST00000377194 NFKB1P19838 968 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 MSX2P35548 267 aaPredicted RBP17.38■□□□□ 0.37
TRIM27-201ENST00000377194 THPOP40225 353 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 ABCG1P45844 678 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 GALNT2Q10471 571 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 TMEM135Q86UB9 458 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 DNAAF3Q8N9W5 541 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 RAB3IL1Q8TBN0 382 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 ACMSDQ8TDX5 336 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 DPF3Q92784 378 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 TMIGD2Q96BF3 282 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 ZNF669Q96BR6 464 aaPredicted RBP17.38■□□□□ 0.37
TRIM27-201ENST00000377194 HDAC11Q96DB2 347 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 RMI1Q9H9A7 625 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 TMEM216Q9P0N5 145 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 CASQ2O14958 399 aaPredicted RBP17.38■□□□□ 0.37
TRIM27-201ENST00000377194 FGF3P11487 239 aaPredicted RBP17.38■□□□□ 0.37
TRIM27-201ENST00000377194 ITGAXP20702 1163 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 OGFRL1Q5TC84 451 aaPredicted RBP17.38■□□□□ 0.37
TRIM27-201ENST00000377194 MAVSQ7Z434 540 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 NUP93Q8N1F7 819 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 CASS4Q9NQ75 786 aa17.38■□□□□ 0.37
TRIM27-201ENST00000377194 BPTFQ12830 3046 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 GPR182O15218 404 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 NCAM2O15394 837 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 F9P00740 461 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 JCHAINP01591 159 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 TYK2P29597 1187 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 ARRB2P32121 409 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 PCLAFQ15004 111 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 CYTH1Q15438 398 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 TEDDM1Q5T9Z0 273 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 ARHGAP36Q6ZRI8 547 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 NCCRP1Q6ZVX7 275 aaPredicted RBP17.37■□□□□ 0.37
TRIM27-201ENST00000377194 DQX1Q8TE96 717 aaKnown RBP17.37■□□□□ 0.37
TRIM27-201ENST00000377194 PKMYT1Q99640 499 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 ACBD6Q9BR61 282 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 GBA3Q9H227 469 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 CHRAC1Q9NRG0 131 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 GABRQQ9UN88 632 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 ARHGAP10A1A4S6 786 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 CDH2P19022 906 aaPredicted RBP17.37■□□□□ 0.37
TRIM27-201ENST00000377194 GP5P40197 560 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 PSMD7P51665 324 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 KCTD21Q4G0X4 260 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 INTS6LQ5JSJ4 861 aaKnown RBP17.37■□□□□ 0.37
TRIM27-201ENST00000377194 SPANXN3Q5MJ09 141 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 VWA5B1Q5TIE3 1220 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 FRMD7Q6ZUT3 714 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 KBTBD6Q86V97 674 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 PLD6Q8N2A8 252 aaKnown RBP17.37■□□□□ 0.37
TRIM27-201ENST00000377194 CNTD1Q8N815 330 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 IRGQQ8WZA9 623 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 ZNF419Q96HQ0 510 aaPredicted RBP17.37■□□□□ 0.37
TRIM27-201ENST00000377194 ZFRQ96KR1 1074 aaKnown RBP17.37■□□□□ 0.37
TRIM27-201ENST00000377194 SIK2Q9H0K1 926 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 LRRC40Q9H9A6 602 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 PNPOQ9NVS9 261 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 BFARQ9NZS9 450 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 CEPT1Q9Y6K0 416 aa17.37■□□□□ 0.37
TRIM27-201ENST00000377194 DENRO43583 198 aaKnown RBP17.36■□□□□ 0.37
TRIM27-201ENST00000377194 PEX1O43933 1283 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 KPNA6O60684 536 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 GLRA3O75311 464 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 ODC1P11926 461 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 NCF2P19878 526 aaPredicted RBP17.36■□□□□ 0.37
TRIM27-201ENST00000377194 SLC1A6P48664 564 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 CDKL1Q00532 357 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 STXBP5Q5T5C0 1151 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 OTOP3Q7RTS5 596 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 C10orf107Q8IVU9 208 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 FBXW8Q8N3Y1 598 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 DCLK2Q8N568 766 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 RNF34Q969K3 372 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 SLC35B4Q969S0 331 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 TXNDC16Q9P2K2 825 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 DCDC2Q9UHG0 476 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 DOLKQ9UPQ8 538 aa17.36■□□□□ 0.37
TRIM27-201ENST00000377194 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.36■□□□□ 0.37
TRIM27-201ENST00000377194 RAD54BQ9Y620 910 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms