RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FOLH1Q04609 750 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 ZNF33AQ06730 810 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 PIGGQ5H8A4 983 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 MFSD6LQ8IWD5 586 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 CCNYL1Q8N7R7 359 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 C3orf58Q8NDZ4 430 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 STON2Q8WXE9 905 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 GAD1Q99259 594 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 SPATA16Q9BXB7 569 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 SIK2Q9H0K1 926 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 VPS28Q9UK41 221 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 SHROOM3Q8TF72 1996 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 SCN4AP35499 1836 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 PGK1P00558 417 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 XRCC1P18887 633 aaPredicted RBP25.62■■□□□ 1.69
C9orf40-201ENST00000376854 CCNCP24863 283 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 ESRP1Q6NXG1 681 aaKnown RBP25.62■■□□□ 1.69
C9orf40-201ENST00000376854 FBXL19Q6PCT2 694 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 ATPAF2Q8N5M1 289 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 GPR78Q96P69 363 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 GCNAQ96QF7 691 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 FICDQ9BVA6 458 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 UNKQ9C0B0 810 aaKnown RBP25.62■■□□□ 1.69
C9orf40-201ENST00000376854 ANXA9O76027 345 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 ENO3P13929 434 aaPredicted RBP25.62■■□□□ 1.69
C9orf40-201ENST00000376854 PKNOX1P55347 436 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 SATB1Q01826 763 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 HERC3Q15034 1050 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 CNPY1Q3B7I2 92 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 PGAM4Q8N0Y7 254 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 PPHLN1Q8NEY8 458 aaKnown RBP25.62■■□□□ 1.69
C9orf40-201ENST00000376854 ZNF419Q96HQ0 510 aaPredicted RBP25.62■■□□□ 1.69
C9orf40-201ENST00000376854 FCRL5Q96RD9 977 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 OMDQ99983 421 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 ZBTB26Q9HCK0 441 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 TBC1D30Q9Y2I9 924 aa25.62■■□□□ 1.69
C9orf40-201ENST00000376854 CEP350Q5VT06 3117 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 THP07101 528 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 GSTT1P30711 240 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 ARCN1P48444 511 aaKnown RBP25.61■■□□□ 1.69
C9orf40-201ENST00000376854 POLD2P49005 469 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 MRPS22P82650 360 aaKnown RBP25.61■■□□□ 1.69
C9orf40-201ENST00000376854 DQX1Q8TE96 717 aaKnown RBP25.61■■□□□ 1.69
C9orf40-201ENST00000376854 IRGQQ8WZA9 623 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 USP13Q92995 863 aaPredicted RBP25.61■■□□□ 1.69
C9orf40-201ENST00000376854 MYLPFQ96A32 169 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 DCUN1D1Q96GG9 259 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 OSBPL2Q9H1P3 480 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 GLOD4Q9HC38 313 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 CSNK1G1Q9HCP0 422 aa25.61■■□□□ 1.69
C9orf40-201ENST00000376854 ARNTP27540 789 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 MSX2P35548 267 aaPredicted RBP25.6■■□□□ 1.69
C9orf40-201ENST00000376854 CHN2P52757 468 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 TSTD2Q5T7W7 516 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 DENND5AQ6IQ26 1287 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 PDCD6IPQ8WUM4 868 aaKnown RBP25.6■■□□□ 1.69
C9orf40-201ENST00000376854 WDR41Q9HAD4 459 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 SLC2A6Q9UGQ3 507 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 NEU3Q9UQ49 428 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 PCSK1P29120 753 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 ART3Q13508 389 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 CEACAM7Q14002 265 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 ARHGAP12Q8IWW6 846 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 KDM1BQ8NB78 822 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 ELMO2Q96JJ3 720 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 LRGUKQ96M69 825 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 MIOSQ9NXC5 875 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 BCAP29Q9UHQ4 241 aa25.6■■□□□ 1.69
C9orf40-201ENST00000376854 COPG1Q9Y678 874 aaKnown RBP25.6■■□□□ 1.69
C9orf40-201ENST00000376854 TMEM233B4DJY2 109 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 CELF2O95319 508 aaKnown RBP25.59■■□□□ 1.69
C9orf40-201ENST00000376854 CHRM1P11229 460 aaPredicted RBP25.59■■□□□ 1.69
C9orf40-201ENST00000376854 SLC1A2P43004 574 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 C11orf91Q3C1V1 193 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 ZFP1Q6P2D0 407 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 UGT2A3Q6UWM9 527 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 PIP4K2CQ8TBX8 421 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 UBE2OQ9C0C9 1292 aaKnown RBP25.59■■□□□ 1.69
C9orf40-201ENST00000376854 MRPL46Q9H2W6 279 aaKnown RBP25.59■■□□□ 1.69
C9orf40-201ENST00000376854 EFCAB1Q9HAE3 211 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 TADA2AO75478 443 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 RARS2Q5T160 578 aaKnown RBP25.59■■□□□ 1.69
C9orf40-201ENST00000376854 RNF148Q8N7C7 305 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 LPPQ93052 612 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 TCAF1Q9Y4C2 921 aa25.59■■□□□ 1.69
C9orf40-201ENST00000376854 CASTOR2A6NHX0 329 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 BDNFP23560 247 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 GRIA2P42262 883 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 DPP6P42658 865 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 CPT1AP50416 773 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 MS4A2Q01362 244 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 CNGA3Q16281 694 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 POTEHQ6S545 545 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 BHLHE22Q8NFJ8 381 aaPredicted RBP25.58■■□□□ 1.69
C9orf40-201ENST00000376854 SGF29Q96ES7 293 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 IL12RB2Q99665 862 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 FAM105AQ9NUU6 356 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 NCKIPSDQ9NZQ3 722 aa25.58■■□□□ 1.69
C9orf40-201ENST00000376854 NPHS1O60500 1241 aa25.58■■□□□ 1.68
C9orf40-201ENST00000376854 GEMP55040 296 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms