RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 OSMRQ99650 979 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ASTN2O75129 1339 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 TTPAP49638 278 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 NRG3P56975 720 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 VBP1P61758 197 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 BTN3A2P78410 334 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 SLC45A4Q5BKX6 768 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 DET1Q7L5Y6 550 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 SNAP91O60641 907 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 HOXB8P17481 243 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 PDHA2P29803 388 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 PDX1P52945 283 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 PEX6Q13608 980 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 GRIK4Q16099 956 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 SCUBE3Q8IX30 993 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ADGRG2Q8IZP9 1017 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 CXorf40AQ8TE69 158 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 PIH1D2Q8WWB5 315 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ATXN2LQ8WWM7 1075 aaKnown RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 NAALADL1Q9UQQ1 740 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 AREL1O15033 823 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 TSPAN3O60637 253 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 NAA20P61599 178 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 CREMQ03060 361 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 PYDC1Q8WXC3 89 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ELMO1Q92556 727 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ATXN3LQ9H3M9 355 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 GPATCH2LQ9NWQ4 482 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 CSF1RP07333 972 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF135P52742 658 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 AGO4Q9HCK5 861 aaKnown RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 OR5F1O95221 314 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 BUD31P41223 144 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 MRPS22P82650 360 aaKnown RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 MARK2Q7KZI7 788 aaKnown RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 POP5Q969H6 163 aaKnown RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 MARK1Q9P0L2 795 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 URADA6NGE7 173 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 GCNT7Q6ZNI0 430 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ATP13A3Q9H7F0 1226 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 DUSP10Q9Y6W6 482 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 TPP1O14773 563 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 MLYCDO95822 493 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 PRLRP16471 622 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 AMD1P17707 334 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 RPL14P50914 215 aaKnown RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 MYBPC3Q14896 1274 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 MOXD1Q6UVY6 613 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 CRELD1Q96HD1 420 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 FAM210AQ96ND0 272 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 VAPBO95292 243 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 POMCP01189 267 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 AKAP14Q86UN6 197 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 VPS35Q96QK1 796 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 C15orf41Q9Y2V0 281 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF780BQ9Y6R6 833 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 TEX46H3BTG2 121 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 TTKP33981 857 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 CHN2P52757 468 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 HIPK1Q86Z02 1210 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 ABRAQ8N0Z2 381 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 GMCL1P1Q8NEA9 526 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 ADAM32Q8TC27 787 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 MAGEE2Q8TD90 523 aaPredicted RBP12.58□□□□□ -0.39
VPS13A-204ENST00000376634 POLR1EQ9GZS1 481 aaKnown RBP12.58□□□□□ -0.39
VPS13A-204ENST00000376634 SMPD4Q9NXE4 827 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 KCNK4Q9NYG8 393 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 ARMCX1Q9P291 453 aa12.58□□□□□ -0.39
VPS13A-204ENST00000376634 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.39
VPS13A-204ENST00000376634 TRDMT1O14717 391 aaKnown RBP12.58□□□□□ -0.4
VPS13A-204ENST00000376634 RIPK2O43353 540 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 SNRPD1P62314 119 aaKnown RBP12.58□□□□□ -0.4
VPS13A-204ENST00000376634 ARHGAP36Q6ZRI8 547 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
VPS13A-204ENST00000376634 SPATA20Q8TB22 786 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 SPAG4Q9NPE6 437 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 C8orf4Q9NR00 106 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 MARCH2Q9P0N8 246 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 FAM50BQ9Y247 325 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 TMCC2O75069 709 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 HOXC6P09630 235 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 RAPSNQ13702 412 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 Q4G0T1 1027 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 SUSD6Q92537 303 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 CNPPD1Q9BV87 410 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 TRIM2Q9C040 744 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 DKK3Q9UBP4 350 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 TBC1D30Q9Y2I9 924 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 SLC26A3P40879 764 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.4
VPS13A-204ENST00000376634 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms