RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	ARSA	P15289	507 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	SERPINA4	P29622	427 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	FAM189B	P81408	668 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	CDK18	Q07002	472 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	SGCG	Q13326	291 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	FAM133B	Q5BKY9	247 aa	Known RBP	13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	CMAS	Q8NFW8	434 aa	Predicted RBP	13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	SERPINB12	Q96P63	405 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	GLOD4	Q9HC38	313 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	C2orf71	A6NGG8	1288 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	NCAM2	O15394	837 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	CDH16	O75309	829 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	TMEM63A	O94886	807 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	TTC4	O95801	387 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	RHOQ	P17081	205 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	DNAJC3	Q13217	504 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	CCDC121	Q6ZUS5	278 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	C11orf96	Q7Z7L8	435 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	KCNMB4	Q86W47	210 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	APCDD1	Q8J025	514 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	DCBLD1	Q8N8Z6	715 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	FUT8	Q9BYC5	575 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	OSBPL6	Q9BZF3	934 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	AASDHPPT	Q9NRN7	309 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	YBX2	Q9Y2T7	364 aa	Known RBP	13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	SEC16A	O15027	2179 aa		13.71	□□□□□ -0.21
DDR1-225	ENST00000376568	IQCF5	A8MTL0	148 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A9	O60656	530 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	PPFIA2	O75334	1257 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A6	P19224	532 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A1	P22309	533 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A4	P22310	534 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	PTPN3	P26045	913 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A3	P35503	534 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A5	P35504	534 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	SERPINH1	P50454	418 aa	Known RBP	13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	SNRPD1	P62314	119 aa	Known RBP	13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	ZBTB17	Q13105	803 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	MORF4L2	Q15014	288 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	SETDB1	Q15047	1291 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	ZNF284	Q2VY69	593 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	TMCO4	Q5TGY1	634 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	FAM171B	Q6P995	826 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	TRMT10B	Q6PF06	316 aa	Known RBP	13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	TRMT11	Q7Z4G4	463 aa	Known RBP	13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	KCTD13	Q8WZ19	329 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	CPT1B	Q92523	772 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	ULK4	Q96C45	1275 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	LRCH3	Q96II8	777 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	RIPOR3	Q96MK2	946 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A7	Q9HAW7	530 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A10	Q9HAW8	530 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	UGT1A8	Q9HAW9	530 aa		13.71	□□□□□ -0.22
DDR1-225	ENST00000376568	TMCC1	O94876	653 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	PRAMEF12	O95522	483 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	HLA-DQB2	P05538	268 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	VAV1	P15498	845 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	CHN1	P15882	459 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	NFKBIA	P25963	317 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	ALDH3A1	P30838	453 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	ESRP1	Q6NXG1	681 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	KLC3	Q6P597	504 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	TMC3	Q7Z5M5	1100 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	WBP2	Q969T9	261 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	MED4	Q9NPJ6	270 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	DNMT3B	Q9UBC3	853 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	SUPT3H	B4E1H0	165 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	SUPT3H	O75486	399 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	GABBR2	O75899	941 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	GLP2R	O95838	553 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	GMPR	P36959	345 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	MAPK9	P45984	424 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	PARP6	Q2NL67	630 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	MBLAC2	Q68D91	279 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	RAET1G	Q6H3X3	334 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	ZDHHC14	Q8IZN3	488 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	IRGQ	Q8WZA9	623 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	ATP6V1G3	Q96LB4	118 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	PITPNM3	Q9BZ71	974 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	LRRC19	Q9H756	370 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	RUVBL2	Q9Y230	463 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	OR2AG2	A6NM03	316 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568		H3BQF6	201 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	PABPC1	P11940	636 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	HADHA	P40939	763 aa		13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	POU5F1	Q01860	360 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-225	ENST00000376568	TCP11X1	B4DZS4	312 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	DPYSL2	Q16555	572 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	LPAL2	Q16609	132 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	ARSI	Q5FYB1	569 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	GRAMD4	Q6IC98	578 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	LINC00523	Q86TU6	105 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	RPAIN	Q86UA6	219 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	ACAT2	Q9BWD1	397 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	SMOC2	Q9H3U7	446 aa		13.69	□□□□□ -0.22
DDR1-225	ENST00000376568	CD274	Q9NZQ7	290 aa		13.69	□□□□□ -0.22

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