RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 EPN3Q9H201 632 aa11.25□□□□□ -0.61
DDX39B-201ENST00000376177 APOBEC3GQ9HC16 384 aaKnown RBP11.25□□□□□ -0.61
DDX39B-201ENST00000376177 TJP2Q9UDY2 1190 aa11.25□□□□□ -0.61
DDX39B-201ENST00000376177 LCMT1Q9UIC8 334 aa11.25□□□□□ -0.61
DDX39B-201ENST00000376177 STRIP2Q9ULQ0 834 aa11.25□□□□□ -0.61
DDX39B-201ENST00000376177 ERVW-1Q9UQF0 538 aa11.25□□□□□ -0.61
DDX39B-201ENST00000376177 NBASA2RRP1 2371 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 GOLGA6L10A6NI86 522 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PDE2AO00408 941 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 CD58P19256 250 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 MZF1P28698 734 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 EIF4A3P38919 411 aaKnown RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 C1QBPQ07021 282 aaKnown RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 KCNMA1Q12791 1236 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 SFSWAPQ12872 951 aaKnown RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 SKIDA1Q1XH10 827 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 SGO2Q562F6 1265 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PERM1Q5SV97 790 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 ADGRF1Q5T601 910 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 CFAP58Q5T655 872 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PIK3R6Q5UE93 754 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 USP53Q70EK8 1073 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 CLEC14AQ86T13 490 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PRPF39Q86UA1 669 aaKnown RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 SLC22A18ASQ8N1D0 253 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PIAS4Q8N2W9 510 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 P3H4Q92791 437 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PTPRN2Q92932 1015 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 LRRC45Q96CN5 670 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 SGF29Q96ES7 293 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 KLHDC7BQ96G42 594 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PBKQ96KB5 322 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 PSMG3-AS1Q96PY0 264 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 DUSP16Q9BY84 665 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 STOML2Q9UJZ1 356 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 SARDHQ9UL12 918 aa11.24□□□□□ -0.61
DDX39B-201ENST00000376177 ATXN7L1Q9ULK2 861 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-201ENST00000376177 CELSR2Q9HCU4 2923 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 ICE1Q9Y2F5 2266 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 BLACEA4D250 179 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 CCDC188H7C350 402 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 K7ESM1 405 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 SRGAP2O75044 1071 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 GFPT2O94808 682 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 IL1BP01584 269 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 GP1BAP07359 652 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 THEGLP0DJG4 465 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 HARS2P49590 506 aaKnown RBP11.23□□□□□ -0.61
DDX39B-201ENST00000376177 C2orf54Q08AI8 447 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 STAT4Q14765 748 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 TBR1Q16650 682 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 LRRK1Q38SD2 2015 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 ZNF394Q53GI3 561 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 FAM133BQ5BKY9 247 aaKnown RBP11.23□□□□□ -0.61
DDX39B-201ENST00000376177 NADSYN1Q6IA69 706 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 EFL1Q7Z2Z2 1120 aaKnown RBP11.23□□□□□ -0.61
DDX39B-201ENST00000376177 VASH2Q86V25 355 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 IQCHQ86VS3 1027 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 CCDC65Q8IXS2 484 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 KIAA0895Q8NCT3 520 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 OR13H1Q8NG92 308 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 BCAS4Q8TDM0 211 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 PARD3BQ8TEW8 1205 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 HTR3CQ8WXA8 447 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 CCDC97Q96F63 343 aaPredicted RBP11.23□□□□□ -0.61
DDX39B-201ENST00000376177 CDK5RAP1Q96SZ6 601 aaKnown RBP11.23□□□□□ -0.61
DDX39B-201ENST00000376177 CALN1Q9BXU9 219 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 IGSF5Q9NSI5 407 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 PCDHGA8Q9Y5G5 932 aa11.23□□□□□ -0.61
DDX39B-201ENST00000376177 LRRC53A6NM62 1247 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 AGRPO00253 132 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 SLC31A1O15431 190 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 HGFP14210 728 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 C5AR1P21730 350 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 DUSP3P51452 185 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-201ENST00000376177 CLDN2P57739 230 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 TAS2R38P59533 333 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 ST8SIA6P61647 398 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 RPS24P62847 133 aaKnown RBP11.22□□□□□ -0.61
DDX39B-201ENST00000376177 GNGT1P63211 74 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 INCA1Q0VD86 236 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 SLC18A3Q16572 532 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 PITRM1Q5JRX3 1037 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 RAB41Q5JT25 222 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 C1orf220Q5T0J3 134 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 RRAGAQ7L523 313 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 CROCCP2Q86T23 111 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 PIGZQ86VD9 579 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 MFN1Q8IWA4 741 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 APCDD1Q8J025 514 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 IQCKQ8N0W5 287 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 CFAP52Q8N1V2 620 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 TMEM145Q8NBT3 493 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 TAF4BQ92750 862 aa11.22□□□□□ -0.61
DDX39B-201ENST00000376177 FAM131CQ96AQ9 280 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms