RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RNF169Q8NCN4 708 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 TRPV1Q8NER1 839 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 TSPAN14Q8NG11 270 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 CASS4Q9NQ75 786 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 ANLNQ9NQW6 1124 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 BCAP29Q9UHQ4 241 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 NUP205Q92621 2012 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 E7ENX8 843 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 CABYRO75952 493 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 CAPNS1P04632 268 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 ERCC2P18074 760 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 RPL10P27635 214 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 GABRB3P28472 473 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 RALGDSQ12967 914 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 USP41Q3LFD5 358 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 NUP93Q8N1F7 819 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 MYO1HQ8N1T3 1032 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 DDI1Q8WTU0 396 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 TRIB2Q92519 343 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC29A1Q99808 456 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 CCT7Q99832 543 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 MCMBPQ9BTE3 642 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 CAAP1Q9H8G2 361 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 PIGVQ9NUD9 493 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 RCOR3Q9P2K3 495 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 CLDN5O00501 218 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 DCLK1O15075 740 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 MAGEB3O15480 346 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 DDHD2O94830 711 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC35E2BP0CK96 405 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 GNL1P36915 607 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 EMP3P54852 163 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 PSME3P61289 254 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 COG7P83436 770 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 ZBTB17Q13105 803 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 DPYSQ14117 519 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 PAFAH1B3Q15102 231 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 ANO4Q32M45 955 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SH2D4BQ5SQS7 431 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 CYP2R1Q6VVX0 501 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 HFE2Q6ZVN8 426 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SETD3Q86TU7 594 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 PIGZQ86VD9 579 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 ZC3HC1Q86WB0 502 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 CHERPQ8IWX8 916 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 CENPLQ8N0S6 344 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TRIML2Q8N7C3 387 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 KDM1BQ8NB78 822 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 DLG3Q92796 817 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 ABTB1Q969K4 478 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 ITFG2Q969R8 447 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 EMID1Q96A84 441 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 IL22Q9GZX6 179 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SETD4Q9NVD3 440 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 RNF186Q9NXI6 227 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 XPR1Q9UBH6 696 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 AP4S1Q9Y587 144 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 I6L893 689 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 PLOD2O00469 737 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SPTLC1O15269 473 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TADA2AO75478 443 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 BEST1O76090 585 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 IGHA2P01877 340 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 HNRNPLP14866 589 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 NFKB1P19838 968 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 VEGFBP49765 207 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC26A2P50443 739 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 ADARP55265 1226 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 PPIDQ08752 370 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TMEM62Q0P6H9 643 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 KCTD11Q693B1 232 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 KLC3Q6P597 504 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TLK2Q86UE8 772 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 NPWQ8N729 165 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 STYXQ8WUJ0 223 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 NXNL1Q96CM4 212 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TRPV6Q9H1D0 765 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 PCDHGA7Q9Y5G6 932 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 ARHGEF37A1IGU5 675 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 NEMP2A6NFY4 417 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 C9IYK1 514 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TRIM38O00635 465 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 AHSGP02765 367 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 HSPA13P48723 471 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 CDH15P55291 814 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 FCGRTP55899 365 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 CTBP1Q13363 440 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TMED1Q13445 227 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 IKBKEQ14164 716 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 DGKDQ16760 1214 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TSTD2Q5T7W7 516 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 RPS27LQ71UM5 84 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 CEP97Q8IW35 865 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 DENND6AQ8IWF6 608 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 SOCS4Q8WXH5 440 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 TSNARE1Q96NA8 513 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 GPR22Q99680 433 aa14.29□□□□□ -0.12
CLCNKA-202ENST00000375692 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms