RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 ZDHHC2Q9UIJ5 367 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 RBMX2Q9Y388 322 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 TMEM114B3SHH9 223 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 SOCS2O14508 198 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 ARIH2O95376 493 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 APBA3O96018 575 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 RALGDSQ12967 914 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 SEMA5AQ13591 1074 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 CHSY3Q70JA7 882 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 NSMCE3Q96MG7 304 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 UHRF1Q96T88 793 aaPredicted RBP18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 MRPL45Q9BRJ2 306 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 TEX13BQ9BXU2 312 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 DPEP3Q9H4B8 488 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 ZNF385DQ9H6B1 395 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 POLR1BQ9H9Y6 1135 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 PTPRHQ9HD43 1115 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 GMPR2Q9P2T1 348 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 NME7Q9Y5B8 376 aa18.2■□□□□ 0.5
TUBGCP3-202ENST00000375669 RGPD3A6NKT7 1758 aaPredicted RBP18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 RGPD4Q7Z3J3 1758 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ZBTB42B2RXF5 422 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 PFDN6O15212 129 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ALDH1A2O94788 518 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 MT-CO1P00395 513 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 TPSB2P20231 275 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 MYF6P23409 242 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ADORA2BP29275 332 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ADSLP30566 484 aaPredicted RBP18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 NFATC3Q12968 1075 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 TPSAB1Q15661 275 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 KCNJ8Q15842 424 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 PHKG1Q16816 387 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ARL13AQ5H913 290 aaPredicted RBP18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 GALNT18Q6P9A2 607 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 IGFN1Q86VF2 1251 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 PNPLA1Q8N8W4 532 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 COPS5Q92905 334 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 CERS2Q96G23 380 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 SUCOQ9UBS9 1254 aaKnown RBP18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 SLC39A10Q9ULF5 831 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 PTPRFP10586 1907 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 C1orf232A0A0U1RR37 186 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 IQCA1LA6NCM1 817 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 SEC24DO94855 1032 aaPredicted RBP18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 PIGNO95427 931 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 SLC7A1P30825 629 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 RABGGTBP53611 331 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ZBTB17Q13105 803 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 NME3Q13232 169 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 LAYNQ6UX15 382 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 PID1Q7Z2X4 250 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ZC3H7AQ8IWR0 971 aaKnown RBP18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 DNAAF3Q8N9W5 541 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ZNF670Q9BS34 389 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 C1orf50Q9BV19 199 aa18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 ILKAPQ9H0C8 392 aaPredicted RBP18.19■□□□□ 0.5
TUBGCP3-202ENST00000375669 DYNC1LI2O43237 492 aaPredicted RBP18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 C2P06681 752 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 EPHX2P34913 555 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 ETFBP38117 255 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 GSSP48637 474 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 PRKCQQ04759 706 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 OXA1LQ15070 435 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 CERCAMQ5T4B2 595 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 CNTD1Q8N815 330 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 CXorf38Q8TB03 319 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 PPWD1Q96BP3 646 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 TASP1Q9H6P5 420 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 ZBTB26Q9HCK0 441 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 SMOXQ9NWM0 555 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 GPRC5DQ9NZD1 345 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 TMEM9Q9P0T7 183 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 DAPK2Q9UIK4 370 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 GINS2Q9Y248 185 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 ZNF646O15015 1829 aaPredicted RBP18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 HDAC3O15379 428 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 NOL3O60936 208 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.55e-6■■■□□ 15.5
TUBGCP3-202ENST00000375669 GRIA4P48058 902 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 SLC6A3Q01959 620 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 GRM1Q13255 1194 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 SLC10A6Q3KNW5 377 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 EFCAB12Q6NXP0 572 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 ANKFN1Q8N957 763 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 PPP1R13LQ8WUF5 828 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 TOP1MTQ969P6 601 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 SEPT3Q9UH03 358 aa18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 CNOT6Q9ULM6 557 aaKnown RBP18.18■□□□□ 0.5
TUBGCP3-202ENST00000375669 A0A0A0MRY4 1105 aa18.17■□□□□ 0.5
TUBGCP3-202ENST00000375669 TCAF2A6NFQ2 919 aa18.17■□□□□ 0.5
TUBGCP3-202ENST00000375669 ACKR2O00590 384 aa18.17■□□□□ 0.5
TUBGCP3-202ENST00000375669 PGAM1P18669 254 aa18.17■□□□□ 0.5
TUBGCP3-202ENST00000375669 TFEBP19484 476 aa18.17■□□□□ 0.5
TUBGCP3-202ENST00000375669 GP5P40197 560 aa18.17■□□□□ 0.5
TUBGCP3-202ENST00000375669 PSME3P61289 254 aa18.17■□□□□ 0.5
TUBGCP3-202ENST00000375669 SEL1L3Q68CR1 1132 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms