RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 DCTN4Q9UJW0 460 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 A0A0G2JND7 137 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 ZCWPW2A0A1B0GU75 182 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 DNAJC6O75061 913 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 FKTNO75072 461 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 ALDOAP04075 364 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 CPB1P15086 417 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 POLD2P49005 469 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 OVGP1Q12889 678 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 GPR17Q13304 367 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 UGP2Q16851 508 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 TEDDM1Q5T9Z0 273 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 ANKS3Q6ZW76 656 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 ASRGL1Q7L266 308 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 UMODL1-AS1Q8N2C9 162 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 CNTD1Q8N815 330 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 PPHLN1Q8NEY8 458 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 CASD1Q96PB1 797 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 PFDN4Q9NQP4 134 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 C20orf96Q9NUD7 363 aaPredicted RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 THAP1Q9NVV9 213 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 SPO11Q9Y5K1 396 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 PAMP19021 973 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 GRK2P25098 689 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 RENBPP51606 427 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 BST1Q10588 318 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 HNRNPDQ14103 355 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 PDE1CQ14123 709 aaPredicted RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 CERCAMQ5T4B2 595 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 N4BP2L1Q5TBK1 243 aaPredicted RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 FUT10Q6P4F1 479 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 NPAS4Q8IUM7 802 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 TMEM237Q96Q45 408 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 TMEM120AQ9BXJ8 343 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 LRMDAQ9H2I8 198 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 RBM22Q9NW64 420 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■■□ 24.9
UBR4-202ENST00000375224 TMEM248Q9NWD8 314 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 GMIPQ9P107 970 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 IPO11Q9UI26 975 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 HTR3EA5X5Y0 456 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 PLIN3O60664 434 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 DLDP09622 509 aaKnown RBP8.32□□□□□ -1.08
UBR4-202ENST00000375224 MAGEA12P43365 314 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 FXNQ16595 210 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 FASTKD1Q53R41 847 aaKnown RBP8.32□□□□□ -1.08
UBR4-202ENST00000375224 PKN3Q6P5Z2 889 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 CES3Q6UWW8 571 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 OTOP3Q7RTS5 596 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 UBE2Q1Q7Z7E8 422 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 SLC15A3Q8IY34 581 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 RFWD2Q8NHY2 731 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 TSNARE1Q96NA8 513 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 PRKD2Q9BZL6 878 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 NDEL1Q9GZM8 345 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 WWP1Q9H0M0 922 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.082e-7■□□□□ 9.8
UBR4-202ENST00000375224 HEY2Q9UBP5 337 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 HGSO14964 777 aaPredicted RBP8.32□□□□□ -1.08
UBR4-202ENST00000375224 NBNO60934 754 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 SNNO75324 88 aaPredicted RBP8.32□□□□□ -1.08
UBR4-202ENST00000375224 HAUS5O94927 633 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 DNAJB1P25685 340 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 OCRLQ01968 901 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 RING1Q06587 406 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 EFEMP1Q12805 493 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 TAF1BQ53T94 588 aaPredicted RBP8.32□□□□□ -1.08
UBR4-202ENST00000375224 HSP90AA5PQ58FG0 334 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 KLC3Q6P597 504 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 MTDHQ86UE4 582 aaKnown RBP8.32□□□□□ -1.08
UBR4-202ENST00000375224 FAM126BQ8IXS8 530 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 DCLK2Q8N568 766 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 PGLYRP2Q96PD5 576 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 CCT7Q99832 543 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 FSD1LQ9BXM9 530 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 SLC25A51Q9H1U9 297 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 PRDM5Q9NQX1 630 aaPredicted RBP8.32□□□□□ -1.08
UBR4-202ENST00000375224 SNX15Q9NRS6 342 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 OSER1Q9NX31 292 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 ANKRD6Q9Y2G4 727 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 PSAT1Q9Y617 370 aa8.32□□□□□ -1.08
UBR4-202ENST00000375224 MTMR11A4FU01 709 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 APOA4P06727 396 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 HAPLN1P10915 354 aaPredicted RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 ATP6V1C1P21283 382 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 MGAT5BQ3V5L5 792 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 PIK3R6Q5UE93 754 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SDHAF4Q5VUM1 108 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 FAM91A1Q658Y4 838 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 ARHGAP36Q6ZRI8 547 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 CLNKQ7Z7G1 428 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 C14orf80Q86SX3 495 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 ANKLE1Q8NAG6 615 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 ATAD1Q8NBU5 361 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 IPMKQ8NFU5 416 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 PPP4R1Q8TF05 950 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 MFSD3Q96ES6 412 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 APOL2Q9BQE5 337 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 MECRQ9BV79 373 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms