RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 MREGQ8N565 214 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 PDCD7Q8N8D1 485 aaKnown RBP17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 KDM1BQ8NB78 822 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 MRGPRX3Q96LB0 322 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 SERPINB12Q96P63 405 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 NUDCD1Q96RS6 583 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 SEMA3CQ99985 751 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 TICRRQ7Z2Z1 1910 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 LOC730098B7Z3J9 87 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 F5H423 210 aaPredicted RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 K7ERQ8 282 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 TIMM44O43615 452 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 ATP9BO43861 1147 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 ZNF821O75541 412 aaPredicted RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 SRPRAP08240 638 aaKnown RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 DLDP09622 509 aaKnown RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 CSNK1DP48730 415 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 STK19P49842 368 aaPredicted RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 ARL4CP56559 192 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 MESP2Q0VG99 397 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 IHHQ14623 411 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 C22orf39Q6P5X5 142 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 CAND1Q86VP6 1230 aaKnown RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 SLC44A3Q8N4M1 653 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 PCDH20Q8N6Y1 951 aaKnown RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 SPATA22Q8NHS9 363 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 MAFAQ8NHW3 353 aaPredicted RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 CSGALNACT1Q8TDX6 532 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 CASS4Q9NQ75 786 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 ERVW-1Q9UQF0 538 aa17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 FCF1Q9Y324 198 aaKnown RBP17.46■□□□□ 0.39
HLA-DMA-201ENST00000374843 PRRT4C9JH25 899 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 INSIG1O15503 277 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 SMAD6O43541 496 aaKnown RBP17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 MT-CYBP00156 380 aaPredicted RBP17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 GSRP00390 522 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 ATP5BP06576 529 aaKnown RBP17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 CD86P42081 329 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 MAPK8P45983 427 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 LMAN1P49257 510 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 RHOAP61586 193 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 AP1S1P61966 158 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 SARNPP82979 210 aaKnown RBP17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 KDSRQ06136 332 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 SLMAPQ14BN4 828 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 PTPRNQ16849 979 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 NAPEPLDQ6IQ20 393 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 LRRC8BQ6P9F7 803 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 CENPUQ71F23 418 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 LINC00523Q86TU6 105 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 PLPP6Q8IY26 295 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 PDIK1LQ8N165 341 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 ATP11CQ8NB49 1132 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 MYO19Q96H55 970 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 MRGPRX2Q96LB1 330 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 RBM15Q96T37 977 aaKnown RBP eCLIP17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 ARFGAP3Q9NP61 516 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 ELOVL2Q9NXB9 296 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 LIMD1Q9UGP4 676 aa17.45■□□□□ 0.38
HLA-DMA-201ENST00000374843 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 GJB3O75712 270 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 IGSF6O95976 241 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 SERPINF2P08697 491 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 IL9P15248 144 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 CTHP32929 405 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 GRIA2P42262 883 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 WNT3AP56704 352 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 ITKQ08881 620 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 DNAJC21Q5F1R6 531 aaKnown RBP17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 SPDYCQ5MJ68 293 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 NAIF1Q69YI7 327 aaPredicted RBP17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 NCEH1Q6PIU2 408 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 MSANTD3Q96H12 275 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 FEM1CQ96JP0 617 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 EXOC2Q96KP1 924 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 GDAP1L1Q96MZ0 367 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 PWWP2AQ96N64 755 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 TBL1YQ9BQ87 522 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 NOD2Q9HC29 1040 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 SCUBE2Q9NQ36 999 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 SLC2A4RGQ9NR83 387 aa17.44■□□□□ 0.38
HLA-DMA-201ENST00000374843 MYO18AQ92614 2054 aaKnown RBP17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 AP3B1O00203 1094 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 KAT7O95251 611 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 EPOP01588 193 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 CHRM1P11229 460 aaPredicted RBP17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 GRIA1P42261 906 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 TFF2Q03403 129 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 DHX9Q08211 1270 aaKnown RBP17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 MSS51Q4VC12 460 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 DGKKQ5KSL6 1271 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 FNBP1LQ5T0N5 605 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 SYCP2LQ5T4T6 812 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 ARMC3Q5W041 872 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 RANBP10Q6VN20 620 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 SRLQ86TD4 932 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 RALGPS2Q86X27 583 aaPredicted RBP17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 IPMKQ8NFU5 416 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 OR2AP1Q8NGE2 309 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms