RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 SIX5Q8N196 739 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 SLC44A5Q8NCS7 719 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 TCF12Q99081 682 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 DMGDHQ9UI17 866 aaKnown RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 ZDHHC9Q9Y397 364 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 BBIP1A8MTZ0 92 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 H3BNH8 94 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 REM1O75628 298 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 CKMP06732 381 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 SULT1C3Q6IMI6 304 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 PCDHGB3Q9Y5G1 929 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 SEC16AO15027 2179 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 UGT2B11O75310 529 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 IDO1P14902 403 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 GRIA3P42263 894 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 HUNKP57058 714 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 TAS2R41P59536 307 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 EIF5AP63241 154 aaKnown RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 LSM12Q3MHD2 195 aaKnown RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 KCTD21Q4G0X4 260 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 PLET1Q6UQ28 207 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 GPRC5AQ8NFJ5 357 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 SMARCD1Q96GM5 515 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 MTG1Q9BT17 334 aaPredicted RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 C12orf4Q9NQ89 552 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 VPS45Q9NRW7 570 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 KIF1AQ12756 1690 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 FGF10O15520 208 aaPredicted RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 TSHRP16473 764 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 CACNB3P54284 484 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 EHD1Q9H4M9 534 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 TOR4AQ9NXH8 423 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 C6orf222P0C671 652 aaPredicted RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 NR2F6P10588 404 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 TYMPP19971 482 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 RHOAP61586 193 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 FAM171BQ6P995 826 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 SYCE2Q6PIF2 218 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 PTCD2Q8WV60 388 aaKnown RBP8.46□□□□□ -1.06
HSPG2-203ENST00000374695 CST11Q9H112 138 aa8.46□□□□□ -1.06
HSPG2-203ENST00000374695 KDM6BO15054 1643 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 DCXO43602 365 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 RAMP2O60895 175 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 HYIQ5T013 277 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 RUSC1Q9BVN2 902 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 TTPAP49638 278 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 PDX1P52945 283 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 USP46P62068 366 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SCN1BQ07699 218 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 TMEM106CQ9BVX2 250 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SLC35C2Q9NQQ7 365 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 WDR27A2RRH5 827 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 H3BQF6 201 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SCGNO76038 276 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 PROSCO94903 275 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 HMGCS2P54868 508 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SETMARQ53H47 684 aaPredicted RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 USP45Q70EL2 814 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 DQX1Q8TE96 717 aaKnown RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 NUDT12Q9BQG2 462 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 PTGFRNQ9P2B2 879 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 CCNE2O96020 404 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 PLEKP08567 350 aaPredicted RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SEMA6AQ9H2E6 1030 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 TRPV5Q9NQA5 729 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 XPR1Q9UBH6 696 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 PCDHA11Q9Y5I1 949 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 NPHP4O75161 1426 aaPredicted RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SERPINA6P08185 405 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 CRATP43155 626 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 FAXCQ5TGI0 409 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 HTR3CQ8WXA8 447 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 KANSL3Q9P2N6 904 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 NAALADL1Q9UQQ1 740 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 FAM86C2PA6NEL3 165 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 MPZL2O60487 215 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SNX32Q86XE0 403 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 NKAPQ8N5F7 415 aaKnown RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 FAR1Q8WVX9 515 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 AKAP1Q92667 903 aaKnown RBP eCLIP8.45□□□□□ -1.068e-8■■□□□ 13.2
HSPG2-203ENST00000374695 ZNF75CPQ92670 426 aaPredicted RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SERPINB11Q96P15 392 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 CYB561D2O14569 222 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 RBMXL2O75526 392 aaKnown RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 TRMT11Q7Z4G4 463 aaKnown RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 C10orf107Q8IVU9 208 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 KAT5Q92993 513 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 REXO5Q96IC2 774 aaKnown RBP8.45□□□□□ -1.06
HSPG2-203ENST00000374695 PLA2R1Q13018 1463 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 PNPLA6Q8IY17 1366 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 URADA6NGE7 173 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 AVILO75366 819 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 UNC5CO95185 931 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 MYBPC1Q00872 1141 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 SP8Q8IXZ3 490 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 ATG4AQ8WYN0 398 aa8.45□□□□□ -1.06
HSPG2-203ENST00000374695 TDRD1Q9BXT4 1180 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms