RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 BICRALQ6AI39 1079 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 SYCE2Q6PIF2 218 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 AFTPHQ6ULP2 937 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 CYP2R1Q6VVX0 501 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 APBA2Q99767 749 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 FDXACB1Q9BRP7 624 aaPredicted RBP6.66□□□□□ -1.34
CHD6-203ENST00000373233 GNPTGQ9UJJ9 305 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 RUVBL2Q9Y230 463 aaKnown RBP6.66□□□□□ -1.34
CHD6-203ENST00000373233 H7C0S8 307 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 HS6ST1O60243 411 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 COILP38432 576 aaPredicted RBP6.66□□□□□ -1.34
CHD6-203ENST00000373233 AQP4P55087 323 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 MAP2K5Q13163 448 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 GPAT2Q6NUI2 795 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 ZNF410Q86VK4 478 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 L3MBTL3Q96JM7 780 aaPredicted RBP6.66□□□□□ -1.34
CHD6-203ENST00000373233 FAR2Q96K12 515 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 WEE2P0C1S8 567 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 ITGA4P13612 1032 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 FASP25445 335 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 DEFA5Q01523 94 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 IL18R1Q13478 541 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 PYHIN1Q6K0P9 492 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 MYDGFQ969H8 173 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 GPR20Q99678 358 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 SPOCK3Q9BQ16 436 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 EPHB6O15197 1021 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 ITGB3P05106 788 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 GPD2P43304 727 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 PRIM2P49643 509 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 CCNIQ14094 377 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 TFDP2Q14188 446 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 HAGHLQ6PII5 290 aaPredicted RBP6.66□□□□□ -1.34
CHD6-203ENST00000373233 APOPT1Q96IL0 206 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 ZBTB45Q96K62 511 aaPredicted RBP6.66□□□□□ -1.34
CHD6-203ENST00000373233 PRRG3Q9BZD7 231 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 FANCFQ9NPI8 374 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 KLHL11Q9NVR0 708 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 UCKL1Q9NWZ5 548 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 QPCTLQ9NXS2 382 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 NFKBIL1Q9UBC1 381 aaPredicted RBP6.66□□□□□ -1.34
CHD6-203ENST00000373233 PCDHA2Q9Y5H9 948 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 COL1A2P08123 1366 aa6.66□□□□□ -1.34
CHD6-203ENST00000373233 C12orf71A8MTZ7 269 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 CLDN25C9JDP6 229 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 BEX3Q00994 111 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 OTUD3Q5T2D3 398 aaPredicted RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 BAP1Q92560 729 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 RNF25Q96BH1 459 aaPredicted RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 TDRD1Q9BXT4 1180 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 RSPH9Q9H1X1 276 aaPredicted RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 KCNK4Q9NYG8 393 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 NAGPAQ9UK23 515 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 ACKR2O00590 384 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 LCP1P13796 627 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 MYL6P60660 151 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 RPS7P62081 194 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 METTL21CQ5VZV1 264 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 C4orf50Q6ZRC1 276 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 IFNL1Q8IU54 200 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 KBTBD7Q8WVZ9 684 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 VPS33AQ96AX1 596 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 OR2B2Q9GZK3 357 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 ILKAPQ9H0C8 392 aaPredicted RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 INTS10Q9NVR2 710 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 DNM1LO00429 736 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 IFNA14P01570 189 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 AZGP1P25311 298 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 NFE2L1Q14494 772 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 CYP51A1Q16850 503 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 RGMBQ6NW40 437 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 NXNL1Q96CM4 212 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 OSMRQ99650 979 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 PDGFCQ9NRA1 345 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.65□□□□□ -1.342e-14■□□□□ 9.2
CHD6-203ENST00000373233 SLC24A2Q9UI40 661 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 DNAJC16Q9Y2G8 782 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 SNX9Q9Y5X1 595 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 SCN4AP35499 1836 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 GSTT2P0CG29 244 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 GSTT2BP0CG30 244 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 FEN1P39748 380 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 MAGEA10P43363 369 aaPredicted RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 SMCO1Q147U7 214 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 THEM5Q8N1Q8 247 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 TTC29Q8NA56 475 aaPredicted RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 SSX3Q99909 188 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 NIFKQ9BYG3 293 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 STARD13Q9Y3M8 1113 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 ZNF682O95780 498 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 DLG1Q12959 904 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 SV2CQ496J9 727 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 FAM98BQ52LJ0 330 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 C6orf52Q5T4I8 152 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 PAGE2Q7Z2X7 111 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 CACTIN-AS1Q8N1I8 211 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 RAB2BQ8WUD1 216 aa6.65□□□□□ -1.34
CHD6-203ENST00000373233 CDC42EP4Q9H3Q1 356 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 NGRNQ9NPE2 291 aaKnown RBP6.65□□□□□ -1.34
CHD6-203ENST00000373233 DHX15O43143 795 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms