RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 C20orf27Q9GZN8 174 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ZCWPW1Q9H0M4 648 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ZNF696Q9H7X3 374 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 PLAC1Q9HBJ0 212 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SMYD2Q9NRG4 433 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 TMLHEQ9NVH6 421 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 MOCS1Q9NZB8 636 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CDH9Q9ULB4 789 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 BARX2Q9UMQ3 279 aaPredicted RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 DMTF1Q9Y222 760 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 DNAJC16Q9Y2G8 782 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 DTNAQ9Y4J8 743 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 HCFC2Q9Y5Z7 792 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SCN1AP35498 2009 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 HMX2A2RU54 273 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 H3BNX3 289 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 DPYSL4O14531 572 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 APOL1O14791 398 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 PLIN3O60664 434 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CILPO75339 1184 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 GCATO75600 419 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ZBED1O96006 694 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 GSRP00390 522 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ITGA2BP08514 1039 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SMIM18P0DKX4 95 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CSH1P0DML2 217 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CSH2P0DML3 217 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 KITP10721 976 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 IMPDH2P12268 514 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 PTPN1P18031 435 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 GPD1P21695 349 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 GRIA2P42262 883 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 RANBP1P43487 201 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 IDH3AP50213 366 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 GPR17Q13304 367 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 TRIP10Q15642 601 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 MDH1BQ5I0G3 518 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 INTS6LQ5JSJ4 861 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 PDPK2PQ6A1A2 396 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SLC9A4Q6AI14 798 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 RBM12BQ8IXT5 1001 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 DCP1BQ8IZD4 617 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ATAD1Q8NBU5 361 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 VN1R2Q8NFZ6 395 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ZNF461Q8TAF7 563 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 PYDC1Q8WXC3 89 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 NT5C1AQ9BXI3 368 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 ELOVL4Q9GZR5 314 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CRTAC1Q9NQ79 661 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CLDND1Q9NY35 253 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 CNOT11Q9UKZ1 510 aaKnown RBP11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
TSPAN1-201ENST00000372003 C15orf38-AP3S2A0A0A6YYH1 394 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 CCDC195A0A1B0GUA6 201 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 H0YJX3 145 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 KCNN4O15554 427 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 H2AFYO75367 372 aaKnown RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 CLPTM1O96005 669 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 ZFXP17010 805 aaPredicted RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 ITGAXP20702 1163 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 PEX2P28328 305 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 ALDH1A3P47895 512 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 CDH6P55285 790 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 INCA1Q0VD86 236 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 TBL3Q12788 808 aaKnown RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 DLG1Q12959 904 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 CCDC153Q494R4 210 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 RARS2Q5T160 578 aaKnown RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 LPCAT4Q643R3 524 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 LILRA6Q6PI73 481 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 C16orf89Q6UX73 402 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 ARPINQ7Z6K5 226 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 SETD3Q86TU7 594 aaPredicted RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 UNC93AQ86WB7 457 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 PQLC1Q8N2U9 271 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 PLD5Q8N7P1 536 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 C12orf29Q8N999 325 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 B3GALNT2Q8NCR0 500 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 KREMEN2Q8NCW0 462 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 SLC22A17Q8WUG5 538 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 DEPDC1BQ8WUY9 529 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 HSPH1Q92598 858 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 DLG3Q92796 817 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 TNIP3Q96KP6 325 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 HEXIM2Q96MH2 286 aaKnown RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 CATSPER2Q96P56 530 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 CDCA3Q99618 268 aaPredicted RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 NAT9Q9BTE0 207 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 PRDM16Q9HAZ2 1276 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 CYP4F11Q9HBI6 524 aa11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 ABI2Q9NYB9 513 aaPredicted RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 MARCOQ9UEW3 520 aaPredicted RBP11.63□□□□□ -0.55
TSPAN1-201ENST00000372003 COL4A4P53420 1690 aaPredicted RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 MTMR11A4FU01 709 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 TMEM114B3SHH9 223 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 ZNF195O14628 629 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 PRRG1O14668 218 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 PRPSAP2O60256 369 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms