RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CMPK2Q5EBM0 449 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 LRRC74BQ6ZQY2 392 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 TFAP2DQ7Z6R9 452 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 KIRREL3Q8IZU9 778 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 UMODL1-AS1Q8N2C9 162 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 FSTL5Q8N475 847 aaPredicted RBP29.29■■■□□ 2.28
SSBP3-204ENST00000371320 STYXQ8WUJ0 223 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 NRG4Q8WWG1 115 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 PRKD2Q9BZL6 878 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 SLC25A51Q9H1U9 297 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 GMIPQ9P107 970 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 RAP2CQ9Y3L5 183 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 A0A088AWK7 358 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 DCXO43602 365 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 CHRNGP07510 517 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 KIAA0930Q6ICG6 404 aaPredicted RBP29.29■■■□□ 2.28
SSBP3-204ENST00000371320 LRRC8EQ6NSJ5 796 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 CEP97Q8IW35 865 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 MFSD6LQ8IWD5 586 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 MAPK15Q8TD08 544 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 ZNF212Q9UDV6 495 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 TTC3P53804 2025 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 TMEM88BA6NKF7 163 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 E9PBE3 544 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 KLHL41O60662 606 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 MPSTP25325 297 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 CRABP2P29373 138 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 RENBPP51606 427 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 USP46P62068 366 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 HNRNPDQ14103 355 aaKnown RBP29.28■■■□□ 2.28
SSBP3-204ENST00000371320 ZNF460Q14592 562 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 METTL21CQ5VZV1 264 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 ZNF470Q6ECI4 717 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 PHTF2Q8N3S3 785 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 C2CD4AQ8NCU7 369 aaPredicted RBP29.28■■■□□ 2.28
SSBP3-204ENST00000371320 MOCOSQ96EN8 888 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 ZNF333Q96JL9 665 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 FAM167BQ9BTA0 163 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 SHCBP1LQ9BZQ2 653 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 PCDHB5Q9Y5E4 795 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 CEP350Q5VT06 3117 aa29.28■■■□□ 2.28
SSBP3-204ENST00000371320 NYNRINQ9P2P1 1898 aaKnown RBP29.27■■■□□ 2.28
SSBP3-204ENST00000371320 RHOQP17081 205 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 CD151P48509 253 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 NDST2P52849 883 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 ACLYP53396 1101 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 KDELC1Q6UW63 502 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 RNF180Q86T96 592 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 SLC25A41Q8N5S1 370 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 ELMO2Q96JJ3 720 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 FAM193BQ96PV7 902 aaPredicted RBP29.27■■■□□ 2.28
SSBP3-204ENST00000371320 ZYG11BQ9C0D3 744 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 ACSS2Q9NR19 701 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 DNAJB4Q9UDY4 337 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 TADA2AO75478 443 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 PEX11BO96011 259 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 ACADSP16219 412 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 NAGLUP54802 743 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 EFEMP1Q12805 493 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 MS4A13Q5J8X5 152 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 VARS2Q5ST30 1063 aaKnown RBP29.27■■■□□ 2.28
SSBP3-204ENST00000371320 ZNF683Q8IZ20 524 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 LINC01599Q8WXQ3 324 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 HMCESQ96FZ2 354 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 NT5MQ9NPB1 228 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 TCF7L2Q9NQB0 619 aa29.27■■■□□ 2.28
SSBP3-204ENST00000371320 PRDM5Q9NQX1 630 aaPredicted RBP29.27■■■□□ 2.28
SSBP3-204ENST00000371320 MYO16Q9Y6X6 1858 aa29.26■■■□□ 2.28
SSBP3-204ENST00000371320 MATN2O00339 956 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 RPL14P50914 215 aaKnown RBP29.26■■■□□ 2.27
SSBP3-204ENST00000371320 ITKQ08881 620 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 ARL13AQ5H913 290 aaPredicted RBP29.26■■■□□ 2.27
SSBP3-204ENST00000371320 NEPROQ6NW34 567 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 NXNL1Q96CM4 212 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 XPR1Q9UBH6 696 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 FBXO5Q9UKT4 447 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 ANGPTL2Q9UKU9 493 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 TLL2Q9Y6L7 1015 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 WASF2Q9Y6W5 498 aa29.26■■■□□ 2.27
SSBP3-204ENST00000371320 FNDC1Q4ZHG4 1894 aaPredicted RBP29.26■■■□□ 2.27
SSBP3-204ENST00000371320 LOC100653049A0A140TA62 436 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 TARM1B6A8C7 271 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 ZBTB14O43829 449 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 KRT34O76011 436 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 MBTPS1Q14703 1052 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 RALGPS1Q5JS13 557 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 MYLK4Q86YV6 388 aaPredicted RBP29.25■■■□□ 2.27
SSBP3-204ENST00000371320 IMP4Q96G21 291 aaKnown RBP29.25■■■□□ 2.27
SSBP3-204ENST00000371320 OR52B2Q96RD2 323 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 ARNT2Q9HBZ2 717 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 DONSONQ9NYP3 566 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 J3KR12 359 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 HDAC3O15379 428 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 PIGNO95427 931 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 PRDX6P30041 224 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 CDC25CP30307 473 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 CCR10P46092 362 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 HK2P52789 917 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 FAM189BP81408 668 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 ZRSR2Q15696 482 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms