RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ARHGAP36Q6ZRI8 547 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 HDDC3Q8N4P3 179 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 NETO2Q8NC67 525 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 GRIN3AQ8TCU5 1115 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 TFB1MQ8WVM0 346 aaKnown RBP13.97□□□□□ -0.17
SSR4-202ENST00000370085 RLN3Q8WXF3 142 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 ALG3Q92685 438 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 FOXJ1Q92949 421 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 NKD2Q969F2 451 aaPredicted RBP13.97□□□□□ -0.17
SSR4-202ENST00000370085 TUBGCP5Q96RT8 1024 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 HEMGNQ9BXL5 484 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 CPEB1Q9BZB8 566 aaKnown RBP13.97□□□□□ -0.17
SSR4-202ENST00000370085 CARD9Q9H257 536 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 ATP13A3Q9H7F0 1226 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
SSR4-202ENST00000370085 JRKLQ9Y4A0 524 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 ACTL7AQ9Y615 435 aa13.97□□□□□ -0.17
SSR4-202ENST00000370085 IGHV1OR15-9A0A0B4J2B8 117 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 HACD1B0YJ81 288 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 DDX3YO15523 660 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 ZNF821O75541 412 aaPredicted RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 LEFTY1O75610 366 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 MAP3K6O95382 1288 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 CCNB1P14635 433 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 NFKBIAP25963 317 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 SERPINA4P29622 427 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 DPP6P42658 865 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 AP1S1P61966 158 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 NHLH1Q02575 133 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 PPIDQ08752 370 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 ITKQ08881 620 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 LLGL1Q15334 1064 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 SYCP2LQ5T4T6 812 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 ATXN7L2Q5T6C5 722 aaPredicted RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 TP53INP2Q8IXH6 220 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 TSEN2Q8NCE0 465 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 CHST14Q8NCH0 376 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 TOE1Q96GM8 510 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 ZC3H10Q96K80 434 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 POLR1EQ9GZS1 481 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 PCED1AQ9H1Q7 454 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 KDM4CQ9H3R0 1056 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 FAM86C1Q9NVL1 165 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 TRMT1Q9NXH9 659 aaKnown RBP13.96□□□□□ -0.17
SSR4-202ENST00000370085 LHX3Q9UBR4 397 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 GMEB2Q9UKD1 530 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 INVSQ9Y283 1065 aa13.96□□□□□ -0.17
SSR4-202ENST00000370085 THADAQ6YHU6 1953 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 A0A1W2PP55 124 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 KCNK3O14649 394 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 STK10O94804 968 aaKnown RBP13.95□□□□□ -0.18
SSR4-202ENST00000370085 CA4P22748 312 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
SSR4-202ENST00000370085 ITGB7P26010 798 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 SCNN1BP51168 640 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 NEK3P51956 506 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 BCL2L1Q07817 233 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 SLC10A7Q0GE19 358 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 SLC10A2Q12908 348 aaPredicted RBP13.95□□□□□ -0.18
SSR4-202ENST00000370085 XRCC4Q13426 336 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 ZNF805Q5CZA5 627 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 LAIR1Q6GTX8 287 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 FBXL19Q6PCT2 694 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 NPNTQ6UXI9 565 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 GDPD4Q6W3E5 623 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 SRLQ86TD4 932 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 FAM124AQ86V42 546 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 REXO1L1PQ8IX06 675 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 TEX26Q8N6G2 289 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 OR6K2Q8NGY2 324 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 HCAR2Q8TDS4 363 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 MAIP1Q8WWC4 291 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 MAML1Q92585 1016 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 LOXL4Q96JB6 756 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 ZNF641Q96N77 438 aaPredicted RBP13.95□□□□□ -0.18
SSR4-202ENST00000370085 OLFM3Q96PB7 478 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 LGMNQ99538 433 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 HDAC8Q9BY41 377 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 NT5MQ9NPB1 228 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 RBM22Q9NW64 420 aaKnown RBP eCLIP13.95□□□□□ -0.18
SSR4-202ENST00000370085 WSB2Q9NYS7 404 aaPredicted RBP13.95□□□□□ -0.18
SSR4-202ENST00000370085 SEPT10Q9P0V9 454 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 EVLQ9UI08 416 aaPredicted RBP13.95□□□□□ -0.18
SSR4-202ENST00000370085 SMG5Q9UPR3 1016 aaKnown RBP13.95□□□□□ -0.18
SSR4-202ENST00000370085 TTLL3Q9Y4R7 772 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 WASF2Q9Y6W5 498 aa13.95□□□□□ -0.18
SSR4-202ENST00000370085 A0A1W2PQ67 120 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 PROB1E7EW31 1015 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 H7C0C1 242 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 SEMA4FO95754 770 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 UGT2B4P06133 528 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 CTSLP07711 333 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 ATP5OP48047 213 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 SUOXP51687 545 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms