RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SH3BP1Q9Y3L3 701 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 GMPPBQ9Y5P6 360 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 TSPAN3O60637 253 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 PEX6Q13608 980 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 SPIDRQ14159 915 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ANGPT1Q15389 498 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 AADATQ8N5Z0 425 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 SERAC1Q96JX3 654 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 COX4I2Q96KJ9 171 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 FAM50BQ9Y247 325 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 PAPSS1O43252 624 aaPredicted RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 USP17L7P0C7H9 530 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 DBTP11182 482 aaKnown RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 RPS12P25398 132 aaKnown RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 MAGEA10P43363 369 aaPredicted RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF135P52742 658 aaPredicted RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 RPS7P62081 194 aaKnown RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 UGCGQ16739 394 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 EGFLAMQ63HQ2 1017 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 HASPINQ8TF76 798 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 SH3BP4Q9P0V3 963 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF180Q9UJW8 692 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 FADS3Q9Y5Q0 445 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 RHOCP08134 193 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 SLC27A1Q6PCB7 646 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 GTF3C2Q8WUA4 911 aaPredicted RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 RNFT2Q96EX2 444 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 TSEN34Q9BSV6 310 aaKnown RBP16.08■□□□□ 0.17
COL17A1-202ENST00000369733 ULBP1Q9BZM6 244 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 SERHL2Q9H4I8 314 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 SERHLQ9NQF3 203 aa16.08■□□□□ 0.17
COL17A1-202ENST00000369733 CBX4O00257 560 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 ERBB2P04626 1255 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.16
COL17A1-202ENST00000369733 CPT1AP50416 773 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 NAA20P61599 178 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 PPP4R4Q6NUP7 873 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 SMARCD1Q96GM5 515 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 PCDH18Q9HCL0 1135 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 CATSPERZQ9NTU4 200 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 OR12D3Q9UGF7 316 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 TMEM59LQ9UK28 342 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
COL17A1-202ENST00000369733 CST1P01037 141 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 GPC1P35052 558 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 RHOAP61586 193 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 RALGDSQ12967 914 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 GLT6D1Q7Z4J2 308 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 PGAM4Q8N0Y7 254 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 FAM45AQ8TCE6 357 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 SPATA2Q9UM82 520 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 MYL12BO14950 172 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 FANCGO15287 622 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 NRP2O60462 931 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 CHRNB2P17787 502 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 SPIRE1Q08AE8 756 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 CTBP1Q13363 440 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 ARMC3Q5W041 872 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 ANO7Q6IWH7 933 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 PRRG3Q9BZD7 231 aa16.08■□□□□ 0.16
COL17A1-202ENST00000369733 PRRG1O14668 218 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 ITGB5P18084 799 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 ST8SIA6P61647 398 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 DCAF12L1Q5VU92 463 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 ZNF621Q6ZSS3 439 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 MCRS1Q96EZ8 462 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 DIABLOQ9NR28 239 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 NOCTQ9UK39 431 aaKnown RBP16.07■□□□□ 0.16
COL17A1-202ENST00000369733 CLCA2Q9UQC9 943 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 PRDX6P30041 224 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 GRIK3Q13003 919 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 ARHGEF6Q15052 776 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 FAM187BQ17R55 369 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 CDH24Q86UP0 819 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 KRT87PA6NCN2 255 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 CASTOR2A6NHX0 329 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 TBX10O75333 385 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 TCEA3O75764 348 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 ANXA11P50995 505 aaKnown RBP16.07■□□□□ 0.16
COL17A1-202ENST00000369733 FBXW4P57775 412 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 PTPN20Q4JDL3 420 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 IL31RAQ8NI17 732 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 FAM198AQ9UFP1 575 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 PADI4Q9UM07 663 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 CENPXA8MT69 81 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 NADKO95544 446 aaPredicted RBP16.07■□□□□ 0.16
COL17A1-202ENST00000369733 CAPN1P07384 714 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 TPSB2P20231 275 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 TBX4P57082 545 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 CBX3Q13185 183 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 TPSAB1Q15661 275 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 UTS2BQ765I0 119 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 FGD2Q7Z6J4 655 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 SLCO6A1Q86UG4 719 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 UNC93AQ86WB7 457 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 PARP8Q8N3A8 854 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 CARNMT1Q8N4J0 409 aa16.07■□□□□ 0.16
COL17A1-202ENST00000369733 AJAP1Q9UKB5 411 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms