RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SLCO2A1Q92959 643 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 SLC2A13Q96QE2 648 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 KCTD15Q96SI1 283 aaPredicted RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 FMO2Q99518 471 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 NCAPGQ9BPX3 1015 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 UBXN6Q9BZV1 441 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 NACA2Q9H009 215 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 VIPAS39Q9H9C1 493 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 POPDC2Q9HBU9 364 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 PNPLA8Q9NP80 782 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 CNGB3Q9NQW8 809 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 TMPRSS4Q9NRS4 437 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 PLK2Q9NYY3 685 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 USP36Q9P275 1121 aaKnown RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 STAP1Q9ULZ2 295 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 LHX6Q9UPM6 363 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 AP4E1Q9UPM8 1137 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 USP3Q9Y6I4 520 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 STON1Q9Y6Q2 735 aa10.2□□□□□ -0.78
TPM3-210ENST00000368530 FASNP49327 2511 aaKnown RBP10.2□□□□□ -0.78
TPM3-210ENST00000368530 CEP192Q8TEP8 1941 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 GOLGA6BA6NDN3 693 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 LTFP02788 710 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 NCAM1P13591 858 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 CD6P30203 668 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 RDXP35241 583 aaKnown RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 GGCXP38435 758 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 HSPA9P38646 679 aaKnown RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 IL12RB1P42701 662 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 DRG2P55039 364 aaKnown RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 DEUP1Q05D60 604 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 DHX9Q08211 1270 aaKnown RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 CALCOCO2Q13137 446 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 TFDP2Q14188 446 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 PDK2Q15119 407 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 GEN1Q17RS7 908 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 PLEKHG6Q3KR16 790 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 ANKRD20A8PQ5CZ79 823 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 CFAP58Q5T655 872 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 DBX2Q6ZNG2 339 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 STRADAQ7RTN6 431 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 GLRX5Q86SX6 157 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 SLCO6A1Q86UG4 719 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 MAP7D3Q8IWC1 876 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 PYROXD2Q8N2H3 581 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 PNPLA1Q8N8W4 532 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 GLIS1Q8NBF1 620 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 TTC13Q8NBP0 860 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 UBLCP1Q8WVY7 318 aaPredicted RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM3-210ENST00000368530 FOXJ1Q92949 421 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 SNF8Q96H20 258 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 RNF157Q96PX1 679 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 NPY6RQ99463 290 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 TMEM121Q9BTD3 319 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 FAM204AQ9H8W3 233 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 THAP10Q9P2Z0 257 aaPredicted RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 FEZ2Q9UHY8 353 aaPredicted RBP10.19□□□□□ -0.78
TPM3-210ENST00000368530 DNMT3LQ9UJW3 386 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 CLEC4EQ9ULY5 219 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 EFR3BQ9Y2G0 817 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 ATP8A1Q9Y2Q0 1164 aa10.19□□□□□ -0.78
TPM3-210ENST00000368530 APOL1O14791 398 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 ENDOD1O94919 500 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 IFNB1P01574 187 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 IGLV3-19P01714 112 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 IL4RP24394 825 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 L1CAMP32004 1257 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 COPAP53621 1224 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 ITGA8P53708 1063 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 EIF3EP60228 445 aaKnown RBP10.18□□□□□ -0.78
TPM3-210ENST00000368530 SCAPQ12770 1279 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 GRIK2Q13002 908 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 OASLQ15646 514 aaKnown RBP10.18□□□□□ -0.78
TPM3-210ENST00000368530 FAM182AQ5T1J6 154 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 TMEM215Q68D42 235 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 BHLHA9Q7RTU4 235 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 TMC3Q7Z5M5 1100 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 CCDC25Q86WR0 208 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 NAXDQ8IW45 347 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 RGL4Q8IZJ4 473 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 MREGQ8N565 214 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 TAB3Q8N5C8 712 aaPredicted RBP10.18□□□□□ -0.78
TPM3-210ENST00000368530 PQLC3Q8N755 202 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 CADM4Q8NFZ8 388 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 PCDH19Q8TAB3 1148 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 SLC35B2Q8TB61 432 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 ART4Q93070 314 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 BHMTQ93088 406 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 LRRC45Q96CN5 670 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 TOE1Q96GM8 510 aaKnown RBP10.18□□□□□ -0.78
TPM3-210ENST00000368530 ZIM3Q96PE6 472 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 RUFY1Q96T51 708 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 PRDM16Q9HAZ2 1276 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 IL21RQ9HBE5 538 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 PIGVQ9NUD9 493 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 CLIC5Q9NZA1 410 aa10.18□□□□□ -0.78
TPM3-210ENST00000368530 MTRF1LQ9UGC7 380 aaKnown RBP10.18□□□□□ -0.78
TPM3-210ENST00000368530 ANAPC5Q9UJX4 755 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms