RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 H0Y8X5 98 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 J3KR12 359 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 ADRB3P13945 408 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 CD38P28907 300 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 MAT2AP31153 395 aaKnown RBP19.25■□□□□ 0.67
CKS1B-203ENST00000368439 NUDT1P36639 197 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 NEK3P51956 506 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 ZNF135P52742 658 aaPredicted RBP19.25■□□□□ 0.67
CKS1B-203ENST00000368439 SNRPD1P62314 119 aaKnown RBP19.25■□□□□ 0.67
CKS1B-203ENST00000368439 SLC25A11Q02978 314 aaKnown RBP19.25■□□□□ 0.67
CKS1B-203ENST00000368439 TBX2Q13207 712 aaPredicted RBP19.25■□□□□ 0.67
CKS1B-203ENST00000368439 SMTNL2Q2TAL5 461 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 BOLA3Q53S33 107 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 NAPEPLDQ6IQ20 393 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 NEK5Q6P3R8 708 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 PRPF39Q86UA1 669 aaKnown RBP19.25■□□□□ 0.67
CKS1B-203ENST00000368439 ZNF354CQ86Y25 554 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 PACSIN1Q9BY11 444 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 SLC32A1Q9H598 525 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 DYRK4Q9NR20 520 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 AASDHPPTQ9NRN7 309 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 ABHD10Q9NUJ1 306 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 DONSONQ9NYP3 566 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 LHX3Q9UBR4 397 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 ZFR2Q9UPR6 939 aaKnown RBP19.25■□□□□ 0.67
CKS1B-203ENST00000368439 DMTF1Q9Y222 760 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 PCDHGB2Q9Y5G2 931 aa19.25■□□□□ 0.67
CKS1B-203ENST00000368439 A0A1W2PQU0 124 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 PRAMEF11O60813 436 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 CBFA2T3O75081 653 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 MFAP3LO75121 409 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 POP4O95707 220 aaKnown RBP19.24■□□□□ 0.67
CKS1B-203ENST00000368439 RARAP10276 462 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 PAPOLAP51003 745 aaKnown RBP19.24■□□□□ 0.67
CKS1B-203ENST00000368439 ADKP55263 362 aaKnown RBP19.24■□□□□ 0.67
CKS1B-203ENST00000368439 CCDC15Q0P6D6 951 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 ZNF284Q2VY69 593 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 SARM1Q6SZW1 724 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 POLNQ7Z5Q5 900 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 ADAT2Q7Z6V5 191 aaKnown RBP19.24■□□□□ 0.67
CKS1B-203ENST00000368439 HORMAD1Q86X24 394 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 NAXDQ8IW45 347 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 TP53INP2Q8IXH6 220 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 TEKT4Q8WW24 435 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 CHP1Q99653 195 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 WASF3Q9UPY6 502 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 MFHAS1Q9Y4C4 1052 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 FADS3Q9Y5Q0 445 aa19.24■□□□□ 0.67
CKS1B-203ENST00000368439 ANKRD36A6QL64 1941 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 SPEGQ15772 3267 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 SPAARA0A1B0GVQ0 90 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 C16orf96A6NNT2 1141 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 KRIT1O00522 736 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 SPINT1O43278 529 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 DAPK3O43293 454 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 ABL2P42684 1182 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 RHOAP61586 193 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 TMEM259Q4ZIN3 620 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 SETMARQ53H47 684 aaPredicted RBP19.23■□□□□ 0.67
CKS1B-203ENST00000368439 ZNF805Q5CZA5 627 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 ARHGAP36Q6ZRI8 547 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 CPNE8Q86YQ8 564 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 RYBPQ8N488 228 aaPredicted RBP19.23■□□□□ 0.67
CKS1B-203ENST00000368439 MFSD2AQ8NA29 543 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 TMEM145Q8NBT3 493 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 BAHD1Q8TBE0 780 aaPredicted RBP19.23■□□□□ 0.67
CKS1B-203ENST00000368439 ZNF564Q8TBZ8 553 aaPredicted RBP19.23■□□□□ 0.67
CKS1B-203ENST00000368439 FAM71BQ8TC56 605 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 TSC1Q92574 1164 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 GDAP1L1Q96MZ0 367 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 ZWILCHQ9H900 591 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 ETNK2Q9NVF9 386 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 UBA2Q9UBT2 640 aaPredicted RBP19.23■□□□□ 0.67
CKS1B-203ENST00000368439 PCOLCE2Q9UKZ9 415 aa19.23■□□□□ 0.67
CKS1B-203ENST00000368439 ARHGAP42A6NI28 874 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 MYO1FO00160 1098 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 INSIG1O15503 277 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 AP1G1O43747 822 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 IGSF6O95976 241 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 UGT2B4P06133 528 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 C21orf59P57076 290 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 NXPH1P58417 271 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 SHBQ15464 509 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 SEL1L3Q68CR1 1132 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 FBXL19Q6PCT2 694 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 SPATS2Q86XZ4 545 aaKnown RBP19.22■□□□□ 0.67
CKS1B-203ENST00000368439 HSPH1Q92598 858 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 KLK6Q92876 244 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 CSPG4P5Q96PW8 444 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 OSBPL1AQ9BXW6 950 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 PCDH18Q9HCL0 1135 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.22■□□□□ 0.67
CKS1B-203ENST00000368439 UVRAGQ9P2Y5 699 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 CA5BQ9Y2D0 317 aa19.22■□□□□ 0.67
CKS1B-203ENST00000368439 A0A1B0GTQ1 180 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 PRAMEF26H0Y7S4 382 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 H3BRJ5 948 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 TLR4O00206 839 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 PCDHGA12O60330 932 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 H2AFZP0C0S5 128 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms