RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 SGCGQ13326 291 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 PLPP4Q5VZY2 271 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 C11orf74Q86VG3 221 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 FAM228AQ86W67 206 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 AGO3Q9H9G7 860 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 RCOR3Q9P2K3 495 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 OPTCQ9UBM4 332 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 CROTQ9UKG9 612 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 PACSIN3Q9UKS6 424 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 LYPLA1O75608 230 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ZNF682O95780 498 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ACADMP11310 421 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 CYP2A6P11509 494 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 GDF10P55107 478 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 PKNOX1P55347 436 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 HPCAP84074 193 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 DSG1Q02413 1049 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 PLCL1Q15111 1095 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 CYP2R1Q6VVX0 501 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 STK40Q8N2I9 435 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 NAT16Q8N8M0 369 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 SEPHS2Q99611 448 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 CCT7Q99832 543 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ATP13A3Q9H7F0 1226 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 NDUFAF1Q9Y375 327 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 TELO2Q9Y4R8 837 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 E9PAM4 449 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 TKTP29401 623 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 NRLP54845 237 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 TCEA2Q15560 299 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 RNASEH2BQ5TBB1 312 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 IL27RAQ6UWB1 636 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 SCIMPQ6UWF3 145 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 TNIP2Q8NFZ5 429 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 B3GALT6Q96L58 329 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 RHOBTB2Q9BYZ6 727 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ZCCHC2Q9C0B9 1178 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ATP6AP2A0A1C7CYW4 349 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 BCLAF3A2AJT9 711 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ATP6AP2O75787 350 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 HNRNPLP14866 589 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■□□ 17.5
PTPRK-203ENST00000368207 ENPEPQ07075 957 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 PCDH20Q8N6Y1 951 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 ACMSDQ8TDX5 336 aa12.43□□□□□ -0.42
PTPRK-203ENST00000368207 FAM120BQ96EK7 910 aaKnown RBP12.43□□□□□ -0.42
PTPRK-203ENST00000368207 TMEM114B3SHH9 223 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 HCRTO43612 131 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ZBTB14O43829 449 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 C1RP00736 705 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 C2P06681 752 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 LPOP22079 712 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 CORO1AP31146 461 aaKnown RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ALDH9A1P49189 494 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ZNF618Q5T7W0 954 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 WLSQ5T9L3 541 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ARHGAP17Q68EM7 881 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 IZUMO2Q6UXV1 221 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 CIR1Q86X95 450 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 CENPLQ8N0S6 344 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SLAIN1Q8ND83 568 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 MTFMTQ96DP5 389 aaKnown RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 MFSD3Q96ES6 412 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 FAM126AQ9BYI3 521 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 COPS7BQ9H9Q2 264 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 KLQ9UEF7 1012 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 WARSP23381 471 aaKnown RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 GRK3P35626 688 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 MSLNQ13421 630 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 FAM45BPQ6NSW5 357 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 PPP4R4Q6NUP7 873 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 RHBDF2Q6PJF5 856 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 PRSS55Q6UWB4 352 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ZNF567Q8N184 647 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 FAM45AQ8TCE6 357 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 MCRS1Q96EZ8 462 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 C16orf96A6NNT2 1141 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 CCL22O00626 93 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 INPP4BO15327 924 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 PEX11AO75192 247 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 RGS20O76081 388 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 MT-CYBP00156 380 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ABCB1P08183 1280 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ACADSP16219 412 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 IL1R2P27930 398 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 CDH13P55290 713 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 DAB2P98082 770 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 LRRC8BQ6P9F7 803 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 TTC33Q6PID6 262 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SERPINA13PQ6UXR4 307 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 C10orf107Q8IVU9 208 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 ZNF786Q8N393 782 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.425e-7■■■■■ 27.3
PTPRK-203ENST00000368207 PCYT2Q99447 389 aa12.42□□□□□ -0.42
PTPRK-203ENST00000368207 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms