RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 QKIQ96PU8 341 aaKnown RBP eCLIP11.72□□□□□ -0.53
USF1-201ENST00000368019 GAD1Q99259 594 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 NDNQ99608 321 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 EBF4Q9BQW3 602 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 NFKBIZQ9BYH8 718 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 ASB7Q9H672 318 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 C10orf88Q9H8K7 445 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 KCNK12Q9HB15 430 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 MAN1C1Q9NR34 630 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 MRGBPQ9NV56 204 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 PCSK1NQ9UHG2 260 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 CNOT11Q9UKZ1 510 aaKnown RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 ARHGAP26Q9UNA1 814 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 DUSP12Q9UNI6 340 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 POMPQ9Y244 141 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 PRG3Q9Y2Y8 225 aaPredicted RBP11.72□□□□□ -0.53
USF1-201ENST00000368019 GMEB1Q9Y692 573 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 CDY1Q9Y6F8 540 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 FRYLO94915 3013 aa11.72□□□□□ -0.53
USF1-201ENST00000368019 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 FANCMQ8IYD8 2048 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 PRR23AA6NEV1 266 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ARHGAP42A6NI28 874 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 F8W810 466 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ZNF195O14628 629 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 PI15O43692 258 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 TMCC1O94876 653 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 URODP06132 367 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ADH1AP07327 375 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 CPA3P15088 417 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 VAV1P15498 845 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ARF4P18085 180 aaPredicted RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 PGAM1P18669 254 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 PTPN9P43378 593 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 RPL5P46777 297 aaKnown RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 IDH3AP50213 366 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 TFAMQ00059 246 aaKnown RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 MBTD1Q05BQ5 628 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 MMRN1Q13201 1228 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 PCLAFQ15004 111 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 DPYSL2Q16555 572 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 FAM187BQ17R55 369 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 NOTUMQ6P988 496 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 LRRC8BQ6P9F7 803 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 C16orf89Q6UX73 402 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 NPNTQ6UXI9 565 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 PACS1Q6VY07 963 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 PSTKQ8IV42 348 aaKnown RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 GPR65Q8IYL9 337 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ICA1LQ8NDH6 482 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ADCY4Q8NFM4 1077 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 B4GALNT2Q8NHY0 566 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 FAM81AQ8TBF8 368 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 SREK1Q8WXA9 508 aaKnown RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 CPB2Q96IY4 423 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 CNDP1Q96KN2 507 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ZFP42Q96MM3 310 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ZNF778Q96MU6 729 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 EPAS1Q99814 870 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 TCHPQ9BT92 498 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 MRPS26Q9BYN8 205 aaKnown RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 C20orf27Q9GZN8 174 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 FZD8Q9H461 694 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 ZNF696Q9H7X3 374 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.53
USF1-201ENST00000368019 IGSF9Q9P2J2 1179 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 EMCNQ9ULC0 261 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 GIT1Q9Y2X7 761 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 HES2Q9Y543 173 aa11.71□□□□□ -0.53
USF1-201ENST00000368019 VWA8A3KMH1 1905 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 CACNA1IQ9P0X4 2223 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 DMXL1Q9Y485 3027 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 M0QYV0 167 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 CYB561D2O14569 222 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 GLUD1P00367 558 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 APOA4P06727 396 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 APRTP07741 180 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 ZCCHC18P0CG32 403 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 HARSP12081 509 aaKnown RBP11.7□□□□□ -0.54
USF1-201ENST00000368019 PDGFRAP16234 1089 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 ITGAXP20702 1163 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 MLH1P40692 756 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 OR1G1P47890 313 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 GLUD2P49448 558 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 SCNN1GP51170 649 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 ABCE1P61221 599 aaKnown RBP11.7□□□□□ -0.54
USF1-201ENST00000368019 BMPR2Q13873 1038 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 UBAP2LQ14157 1087 aaKnown RBP11.7□□□□□ -0.54
USF1-201ENST00000368019 RFTN1Q14699 578 aaPredicted RBP11.7□□□□□ -0.54
USF1-201ENST00000368019 PDK3Q15120 406 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 TAF5Q15542 800 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 MMEL1Q495T6 779 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 CFAP157Q5JU67 520 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 SPANXN3Q5MJ09 141 aa11.7□□□□□ -0.54
USF1-201ENST00000368019 N4BP2L1Q5TBK1 243 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms