RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SPANXN2Q5MJ10 180 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 TCHHL1Q5QJ38 904 aaPredicted RBP15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 TCP10LQ8TDR4 215 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 CCDC167Q9P0B6 97 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 XKR6Q5GH73 641 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 ZCCHC7Q8N3Z6 543 aaKnown RBP15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 OR6Y1Q8NGX8 325 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 BRD9Q9H8M2 597 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 COG5Q9UP83 839 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 TRUB2O95900 331 aaKnown RBP15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 SP100P23497 879 aaPredicted RBP15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 IGFALSP35858 605 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 SCTRP47872 440 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 SRSF11Q05519 484 aaKnown RBP15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 PFKFB4Q16877 469 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 OTOP1Q7RTM1 612 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 EXOC3L1Q86VI1 746 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 PARGQ86W56 976 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 LRRC49Q8IUZ0 686 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 ETNK2Q9NVF9 386 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 CLN6Q9NWW5 311 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 RHBDL2Q9NX52 303 aa15.86■□□□□ 0.13
NUCKS1-201ENST00000367142 ASTN2O75129 1339 aaPredicted RBP15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 APODP05090 189 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 TOP3AQ13472 1001 aaPredicted RBP15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 VGLL4Q14135 290 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 FAM124AQ86V42 546 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 PRDM8Q9NQV8 689 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 MBD2Q9UBB5 411 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 ZNF214Q9UL59 606 aaPredicted RBP15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 CES1P23141 567 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 IL12RB1P42701 662 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 CLCN5P51795 746 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 PAPD7Q5XG87 772 aaKnown RBP15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 ESRP1Q6NXG1 681 aaKnown RBP15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 GPR135Q8IZ08 494 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 CCDC185Q8N715 623 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 FLCNQ8NFG4 579 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 PPP3R2Q96LZ3 170 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 GLUD1P00367 558 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 LGALS3BPQ08380 585 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 ATP13A4Q4VNC1 1196 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 ZNF549Q6P9A3 640 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 CAMK1DQ8IU85 385 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 AADATQ8N5Z0 425 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 MYLPFQ96A32 169 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 CMTM6Q9NX76 183 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 ALADP13716 330 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 PLK1P53350 603 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 EPS8Q12929 822 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 GRM3Q14832 879 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 SNX32Q86XE0 403 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 COMMD9Q9P000 198 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 H2AFXP16104 143 aaPredicted RBP15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 ALOX12P18054 663 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 RBL1P28749 1068 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 DPYSL3Q14195 570 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 WDR93Q6P2C0 686 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 DHRSXQ8N5I4 330 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 TRPV3Q8NET8 790 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 PCDHGC5Q9Y5F6 944 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 PCDHA11Q9Y5I1 949 aa15.85■□□□□ 0.13
NUCKS1-201ENST00000367142 TAL1P17542 331 aaPredicted RBP15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 SULT2A1Q06520 285 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 LSM12Q3MHD2 195 aaKnown RBP15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 UBASH3BQ8TF42 649 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 KCNS3Q9BQ31 491 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 PORCNQ9H237 461 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 CXCL14O95715 111 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 PECAM1P16284 738 aaPredicted RBP15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 BMP7P18075 431 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 LRPAP1P30533 357 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 SPIRE1Q08AE8 756 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 SNAP47Q5SQN1 464 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 BTBD10Q9BSF8 475 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 BPIFA1Q9NP55 256 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 C1orf232A0A0U1RR37 186 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 CYP2R1Q6VVX0 501 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 SLC41A1Q8IVJ1 513 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 HEXDCQ8WVB3 486 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 FCHO1O14526 889 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 UGT1A5P35504 534 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 MAP2K5Q13163 448 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 CBX2Q14781 532 aaPredicted RBP15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 MZT2BQ6NZ67 158 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 MYRFQ9Y2G1 1151 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 KPNA4O00629 521 aaPredicted RBP15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 TPP1O14773 563 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 UBA1P22314 1058 aaKnown RBP15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 ABRQ12979 859 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 NEDD8Q15843 81 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 WASHC2DQ5SRD0 308 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 DCLRE1AQ6PJP8 1040 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 DUSP10Q9Y6W6 482 aa15.84■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3DA0A087WVF3 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3IA0A087WXS9 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3EA0A087X179 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3KA0A087X1G2 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 UBE2QL1A1L167 161 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms