RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 OTOP3Q7RTS5 596 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 ZC3HC1Q86WB0 502 aaKnown RBP13.76□□□□□ -0.21
PRKN-205ENST00000366897 CLVS1Q8IUQ0 354 aaPredicted RBP13.76□□□□□ -0.21
PRKN-205ENST00000366897 MFSD6LQ8IWD5 586 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 CHST13Q8NET6 341 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 MIPOL1Q8TD10 442 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 SLC45A3Q96JT2 553 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 RPL10LQ96L21 214 aaKnown RBP13.76□□□□□ -0.21
PRKN-205ENST00000366897 TSNARE1Q96NA8 513 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 GOLGA2P5Q9HBQ8 144 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 TIMMDC1Q9NPL8 285 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 PIGVQ9NUD9 493 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 MCM3APO60318 1980 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 FBP2O00757 339 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 AHSGP02765 367 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 ZNF23P17027 643 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 GLUD2P49448 558 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 PSMD7P51665 324 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 HUNKP57058 714 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 BST2Q10589 180 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 POU6F1Q14863 301 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 ACBD5Q5T8D3 534 aaPredicted RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 PIGZQ86VD9 579 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 APOBEC3FQ8IUX4 373 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 C2orf69Q8N8R5 385 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 TXNDC5Q8NBS9 432 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 C12orf42Q96LP6 360 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 KLK14Q9P0G3 267 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 CDC14AQ9UNH5 594 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 ZNF510Q9Y2H8 683 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 SHROOM3Q8TF72 1996 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 SOCS2O14508 198 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 GAS2O43903 313 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 SUPT3HO75486 399 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 DDHD2O94830 711 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 ZNF286BP0CG31 522 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 KCNA5P22460 613 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 TNFAIP2Q03169 654 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 TRIM25Q14258 630 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 ANO4Q32M45 955 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 USP41Q3LFD5 358 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 ZNF786Q8N393 782 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 FIBCD1Q8N539 461 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 CPSF7Q8N684 471 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 SPATA22Q8NHS9 363 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 DLG3Q92796 817 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 RMND5BQ96G75 393 aaPredicted RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 OSBPL2Q9H1P3 480 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 FBRSL1Q9HCM7 1045 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 RRN3Q9NYV6 651 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 IGSF9Q9P2J2 1179 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 BCAP29Q9UHQ4 241 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 CNOT6Q9ULM6 557 aaKnown RBP13.75□□□□□ -0.21
PRKN-205ENST00000366897 ANKRD12Q6UB98 2062 aa13.75□□□□□ -0.21
PRKN-205ENST00000366897 C19orf81C9J6K1 198 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 H3BNH8 94 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 AURKAO14965 403 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 AKAP10O43572 662 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 TIMM44O43615 452 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 CABYRO75952 493 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 JCHAINP01591 159 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 CCDC166P0CW27 439 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
PRKN-205ENST00000366897 MATKP42679 507 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 HSPA13P48723 471 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 PLOD1Q02809 727 aaPredicted RBP13.74□□□□□ -0.21
PRKN-205ENST00000366897 ANKRD23Q86SG2 305 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 LRCH3Q96II8 777 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 CAPNS2Q96L46 248 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 PLEKHG4BQ96PX9 1271 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 ATXN3LQ9H3M9 355 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 SETD4Q9NVD3 440 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 MYRFQ9Y2G1 1151 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 ZNF487B1APH4 448 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 BTBD19C9JJ37 291 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 SPTLC1O15269 473 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 TSPAN1O60635 241 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 STAMBPO95630 424 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 AKAP5P24588 427 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
PRKN-205ENST00000366897 YWHAQP27348 245 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 LBX2Q6XYB7 198 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 ZBTB49Q6ZSB9 765 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 CARM1Q86X55 608 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 ANKRD52Q8NB46 1076 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 STYXQ8WUJ0 223 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 ASB9Q96DX5 294 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 ZNF597Q96LX8 424 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 HAUS8Q9BT25 410 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
PRKN-205ENST00000366897 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 CHST12Q9NRB3 414 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 SLC2A6Q9UGQ3 507 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 AURKCQ9UQB9 309 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 CITO14578 2027 aa13.74□□□□□ -0.21
PRKN-205ENST00000366897 HTRA2O43464 458 aaPredicted RBP13.73□□□□□ -0.21
PRKN-205ENST00000366897 HBP1O60381 514 aa13.73□□□□□ -0.21
PRKN-205ENST00000366897 TADA2AO75478 443 aa13.73□□□□□ -0.21
PRKN-205ENST00000366897 TGFB3P10600 412 aa13.73□□□□□ -0.21
PRKN-205ENST00000366897 GRIA3P42263 894 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms