RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 ZBTB17Q13105 803 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 CUL1Q13616 776 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 HNRNPDQ14103 355 aaKnown RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 TRIP13Q15645 432 aaPredicted RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 ELF2Q15723 593 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 CSRP2Q16527 193 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 FUT11Q495W5 492 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 FSCBQ5H9T9 825 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 PITRM1Q5JRX3 1037 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 MARC1Q5VT66 337 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 LAIR1Q6GTX8 287 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 FSTL4Q6MZW2 842 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 RETSATQ6NUM9 610 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 NUDT18Q6ZVK8 323 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 B4GALNT4Q76KP1 1039 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 ETFBKMTQ8IXQ9 262 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 SPEM1Q8N4L4 309 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 GPR161Q8N6U8 529 aaKnown RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 FRMD1Q8N878 549 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 NAT16Q8N8M0 369 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 BBOF1Q8ND07 529 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 OR52K2Q8NGK3 314 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 CCDC110Q8TBZ0 833 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 LRRN4Q8WUT4 740 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 CASKIN2Q8WXE0 1202 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 MAML1Q92585 1016 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 DNASE1L2Q92874 299 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 LRRC45Q96CN5 670 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 ERLEC1Q96DZ1 483 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 PPP1R2P1Q96PQ5 205 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 ERP44Q9BS26 406 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 CINPQ9BW66 212 aaPredicted RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 ACE2Q9BYF1 805 aaPredicted RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 FAM129AQ9BZQ8 928 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 GBA3Q9H227 469 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 C10orf88Q9H8K7 445 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 PDFQ9HBH1 243 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 USP29Q9HBJ7 922 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 GOLGA6AQ9NYA3 693 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 DEC1Q9P2X7 70 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 SEPT3Q9UH03 358 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 RSPH14Q9UHP6 348 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 VPS51Q9UID3 782 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 SLC25A13Q9UJS0 675 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 TRHDEQ9UKU6 1024 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 CLEC4EQ9ULY5 219 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 MRPS17Q9Y2R5 130 aaKnown RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 V9GYY5 206 aaPredicted RBP6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 EML5Q05BV3 1969 aa6.89□□□□□ -1.31
RNU1-55P-201ENST00000365510 FRYQ5TBA9 3013 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SPAG17Q6Q759 2223 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 UQCRHLA0A096LP55 91 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 PATE3B3GLJ2 98 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 E7EVH7 732 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 J3KR12 359 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 CTIFO43310 598 aaKnown RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SNAP91O60641 907 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TULP3O75386 442 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TMCC1O94876 653 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 PEX11BO96011 259 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 JCHAINP01591 159 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ASLP04424 464 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 HLA-DQB2P05538 268 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ATP5BP06576 529 aaKnown RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 UQCRHP07919 91 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 POLR2EP19388 210 aaKnown RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 GLDCP23378 1020 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 CTHP32929 405 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 GJA4P35212 333 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 FDFT1P37268 417 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 HSPA9P38646 679 aaKnown RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 LMAN1P49257 510 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 NUMBP49757 651 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SERPINH1P50454 418 aaKnown RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 GALK1P51570 392 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 CCR3P51677 355 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 PLK1P53350 603 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ARF5P84085 180 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 KDSRQ06136 332 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SLC20A2Q08357 652 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 WASHC5Q12768 1159 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 CALCOCO2Q13137 446 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 COL9A2Q14055 689 aaPredicted RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 PRPSAP1Q14558 356 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 LBRQ14739 615 aaKnown RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 E2F5Q15329 346 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ERCC6LQ2NKX8 1250 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 AASDHQ4L235 1098 aaPredicted RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TEX44Q53QW1 395 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ANKRD20A2Q5SQ80 823 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 STPG1Q5TH74 334 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ANKRD20A1Q5TYW2 823 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ANKRD20A3Q5VUR7 823 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 DUPD1Q68J44 220 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 PCGF5Q86SE9 256 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 LONP2Q86WA8 852 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms