RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 VILLO15195 856 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 RNMTO43148 476 aaKnown RBP3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 TSPAN9O75954 239 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 TMCC1O94876 653 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 SEC31AO94979 1220 aaKnown RBP3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 LATS1O95835 1130 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 IGLV2-14P01704 120 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 TUBB4AP04350 444 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 IRF1P10914 325 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 YWHAQP27348 245 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 POU1F1P28069 291 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 PBX3P40426 434 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 HADHAP40939 763 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 CLCNKBP51801 687 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 NLRP5P59047 1200 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 MC1RQ01726 317 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 SLC18A2Q05940 514 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 WTAPQ15007 396 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 RNPS1Q15287 305 aaKnown RBP3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 MED22Q15528 200 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 SYTL3Q4VX76 610 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 RILPL1Q5EBL4 403 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 ISM2Q6H9L7 571 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 TTI2Q6NXR4 508 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 CYP20A1Q6UW02 462 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 KRBA2Q6ZNG9 492 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 FAM57BQ71RH2 274 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 ENOSF1Q7L5Y1 443 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 GPAT4Q86UL3 456 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 CCDC25Q86WR0 208 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 WDTC1Q8N5D0 677 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 FRMD1Q8N878 549 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 LSMEM1Q8N8F7 131 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 SCFD2Q8WU76 684 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 IGFBPL1Q8WX77 278 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZNF70Q9UC06 446 aaPredicted RBP3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 ADD3Q9UEY8 706 aaKnown RBP3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 LAMP3Q9UQV4 416 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 ADAM18Q9Y3Q7 739 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 DMRT1Q9Y5R6 373 aa3.96□□□□□ -1.78
RNU6-28P-201ENST00000362378 PASKQ96RG2 1323 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 FAM237BA0A1B0GVD1 139 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 hCG_1807616A0A1W2PRN6 198 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 DPPA5A6NC42 116 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 LIASO43766 372 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 HOXB5P09067 269 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 CSH1P0DML2 217 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 CSH2P0DML3 217 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 RARGP13631 454 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 SLC2A4P14672 509 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 TTKP33981 857 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 RYKP34925 604 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 PTGER1P34995 402 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 ACTN2P35609 894 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 SLC16A2P36021 539 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 DPP6P42658 865 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 PTH2RP49190 550 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 ELLP55199 621 aaPredicted RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 PRAMEP78395 509 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 PMPCAQ10713 525 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 AIMP2Q13155 320 aaKnown RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 STIM1Q13586 685 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZNF268Q14587 947 aaPredicted RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 CRYMQ14894 314 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 HIST2H2ACQ16777 129 aaPredicted RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 DPCR1Q3MIW9 517 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 TTC39AQ5SRH9 613 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 KLHL35Q6PF15 583 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 SARM1Q6SZW1 724 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 SZRD1Q7Z422 152 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 TMC8Q8IU68 726 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 ARHGAP12Q8IWW6 846 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZDHHC23Q8IYP9 409 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 ADGRF4Q8IZF3 695 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 HASPINQ8TF76 798 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 PSPC1Q8WXF1 523 aaKnown RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 POMGNT1Q8WZA1 660 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 SMARCE1Q969G3 411 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 PLEKHA4Q9H4M7 779 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 FBRSL1Q9HCM7 1045 aaKnown RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 SPAG4Q9NPE6 437 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 PAPOLBQ9NRJ5 636 aaKnown RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 RNF146Q9NTX7 359 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 HAO1Q9UJM8 370 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 UTS2RQ9UKP6 389 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZNF215Q9UL58 517 aaPredicted RBP3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 MKLN1Q9UL63 735 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 WDR17Q8IZU2 1322 aa3.95□□□□□ -1.78
RNU6-28P-201ENST00000362378 KAT6AQ92794 2004 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 KIR2DS5A0A0G2JLQ3 304 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 FRMD3A2A2Y4 597 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 C17orf102A2RUQ5 167 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 A8MZ25 164 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 MYO1GB0I1T2 1018 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 KIR2DS3K7RE56 304 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 RHODO00212 210 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 PRPF4O43172 522 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 PLOD3O60568 738 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 OR2C1O95371 312 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms