RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 SNX19Q92543 992 aa17.18■□□□□ 0.34
CKLF-204ENST00000362093 TPX2Q9ULW0 747 aaKnown RBP17.18■□□□□ 0.34
CKLF-204ENST00000362093 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 C4orf47A7E2U8 309 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 DFFAO00273 331 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 LATO43561 262 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 SYPP08247 313 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 ITGB7P26010 798 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 HADHBP55084 474 aaKnown RBP17.17■□□□□ 0.34
CKLF-204ENST00000362093 IL10RBQ08334 325 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 SPA17Q15506 151 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 RYBPQ8N488 228 aaPredicted RBP17.17■□□□□ 0.34
CKLF-204ENST00000362093 OR6K2Q8NGY2 324 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 FAF2Q96CS3 445 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 PPP1R16AQ96I34 528 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 GDAP1L1Q96MZ0 367 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 ZDHHC6Q9H6R6 413 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 TM9SF3Q9HD45 589 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 TMEM9BQ9NQ34 198 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 DYRK4Q9NR20 520 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 IMPACTQ9P2X3 320 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 LHX3Q9UBR4 397 aa17.17■□□□□ 0.34
CKLF-204ENST00000362093 IPO11Q9UI26 975 aaKnown RBP17.17■□□□□ 0.34
CKLF-204ENST00000362093 DMXL1Q9Y485 3027 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 KRIT1O00522 736 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 PALMO75781 387 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 NDUFA10O95299 355 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 KDELR1P24390 212 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 GJC1P36383 396 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 SLC1A1P43005 524 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 CSNK1EP49674 416 aaKnown RBP17.16■□□□□ 0.34
CKLF-204ENST00000362093 RHOAP61586 193 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 PPP2CBP62714 309 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 PPP2CAP67775 309 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 BNC1Q01954 994 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 RAD51Q06609 339 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 RFTN1Q14699 578 aaPredicted RBP17.16■□□□□ 0.34
CKLF-204ENST00000362093 ANKRD20A8PQ5CZ79 823 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 ZNF805Q5CZA5 627 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 NEK5Q6P3R8 708 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 RAD9BQ6WBX8 426 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 TRIM69Q86WT6 500 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 MAP7D3Q8IWC1 876 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 PCDH19Q8TAB3 1148 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 RAPGEF5Q92565 580 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 ZNF670Q9BS34 389 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 OSBPL1AQ9BXW6 950 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 CPEB1Q9BZB8 566 aaKnown RBP17.16■□□□□ 0.34
CKLF-204ENST00000362093 ZDHHC5Q9C0B5 715 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 PREBQ9HCU5 417 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 KLHL11Q9NVR0 708 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 TFR2Q9UP52 801 aa17.16■□□□□ 0.34
CKLF-204ENST00000362093 DCHS1Q96JQ0 3298 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 PCDH15Q96QU1 1955 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
CKLF-204ENST00000362093 INSIG1O15503 277 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 MAFKO60675 156 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 IGSF6O95976 241 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 PEX11BO96011 259 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 ADRB3P13945 408 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 SERPINB6P35237 376 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 NOP2P46087 812 aaKnown RBP17.15■□□□□ 0.34
CKLF-204ENST00000362093 CSNK1DP48730 415 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 AFF3P51826 1226 aaKnown RBP17.15■□□□□ 0.34
CKLF-204ENST00000362093 NEK3P51956 506 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 RACK1P63244 317 aaKnown RBP17.15■□□□□ 0.34
CKLF-204ENST00000362093 GRIK2Q13002 908 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 PAFAH1B3Q15102 231 aaKnown RBP17.15■□□□□ 0.34
CKLF-204ENST00000362093 LRRC38Q5VT99 294 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 GDPD4Q6W3E5 623 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 PRPF39Q86UA1 669 aaKnown RBP17.15■□□□□ 0.34
CKLF-204ENST00000362093 TMEM139Q8IV31 216 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 CALN1Q9BXU9 219 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 SP110Q9HB58 689 aa17.15■□□□□ 0.34
CKLF-204ENST00000362093 WDR87Q6ZQQ6 2873 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 DCDC2BA2VCK2 349 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 RCCD1A6NED2 376 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 C3orf70A6NLC5 250 aaPredicted RBP17.14■□□□□ 0.33
CKLF-204ENST00000362093 AP1G1O43747 822 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 UGT2B4P06133 528 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 COMTP21964 271 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 NUDT1P36639 197 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 MAPK8P45983 427 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 RGRP47804 291 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 GRIA4P48058 902 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 NSUN2Q08J23 767 aaKnown RBP eCLIP17.14■□□□□ 0.33
CKLF-204ENST00000362093 NCBP2-AS2Q69YL0 99 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 FBXL19Q6PCT2 694 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 PARS2Q7L3T8 475 aaKnown RBP17.14■□□□□ 0.33
CKLF-204ENST00000362093 LRRC49Q8IUZ0 686 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 PQLC3Q8N755 202 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 SPC24Q8NBT2 197 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 TSEN2Q8NCE0 465 aaKnown RBP17.14■□□□□ 0.33
CKLF-204ENST00000362093 KLHL32Q96NJ5 620 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 ZNF599Q96NL3 588 aa17.14■□□□□ 0.33
CKLF-204ENST00000362093 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.33
CKLF-204ENST00000362093 GTPBP2Q9BX10 602 aaKnown RBP17.14■□□□□ 0.33
CKLF-204ENST00000362093 LUC7LQ9NQ29 371 aaKnown RBP17.14■□□□□ 0.33
CKLF-204ENST00000362093 DNAAF2Q9NVR5 837 aaKnown RBP17.14■□□□□ 0.33
CKLF-204ENST00000362093 REXO2Q9Y3B8 237 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms