RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CCDC154A6NI56 674 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 SIN3BO75182 1162 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 LRIG2O94898 1065 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 AP2A1O95782 977 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF7P17097 686 aaPredicted RBP16.51■□□□□ 0.23
SCAF1-201ENST00000360565 MZF1P28698 734 aaPredicted RBP16.51■□□□□ 0.23
SCAF1-201ENST00000360565 GRIA3P42263 894 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 CLK1P49759 484 aaKnown RBP16.51■□□□□ 0.23
SCAF1-201ENST00000360565 SPDYE7PQ495Y7 208 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 DEFB128Q7Z7B8 93 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 HPS6Q86YV9 775 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 PLD3Q8IV08 490 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 C10orf82Q8WW14 230 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF229Q9UJW7 825 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF839A8K0R7 811 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 RABGGTBP53611 331 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 LPCAT2Q7L5N7 544 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 GPSM1Q86YR5 675 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 SPATA22Q8NHS9 363 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 SNRNP27Q8WVK2 155 aaKnown RBP16.51■□□□□ 0.23
SCAF1-201ENST00000360565 AZIN2Q96A70 460 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 FAM120BQ96EK7 910 aaKnown RBP16.51■□□□□ 0.23
SCAF1-201ENST00000360565 SNX27Q96L92 541 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF556Q9HAH1 456 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 FETUBQ9UGM5 382 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ZMYM5Q9UJ78 669 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF682O95780 498 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 AIF1P55008 147 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 GPX6P59796 221 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 IL2P60568 153 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 PRMT9Q6P2P2 845 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 PKN3Q6P5Z2 889 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 LRRC8DQ7L1W4 858 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 GPR152Q8TDT2 470 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 FIG4Q92562 907 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ASB2Q96Q27 587 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 GRIP2Q9C0E4 1043 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 GIT1Q9Y2X7 761 aa16.51■□□□□ 0.23
SCAF1-201ENST00000360565 MYBPHLA2RUH7 354 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 PTPRNQ16849 979 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 PGS1Q32NB8 556 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 SCIMPQ6UWF3 145 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 STK32CQ86UX6 486 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 LRRC49Q8IUZ0 686 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 RDH11Q8TC12 318 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 SLC4A5Q9BY07 1137 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 SLC27A5Q9Y2P5 690 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 VWA7Q9Y334 891 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 HALP42357 657 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 ZBTB17Q13105 803 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 GRM3Q14832 879 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 DCLRE1AQ6PJP8 1040 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 LENG1Q96BZ8 264 aaPredicted RBP16.5■□□□□ 0.23
SCAF1-201ENST00000360565 FAXDC2Q96IV6 333 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 HNRNPABQ99729 332 aaKnown RBP16.5■□□□□ 0.23
SCAF1-201ENST00000360565 A8MX80 341 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 RAD51BO15315 384 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 URODP06132 367 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 SMPD1P17405 629 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 ATP5C1P36542 298 aaKnown RBP16.5■□□□□ 0.23
SCAF1-201ENST00000360565 LIMK2P53671 638 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 PDK3Q15120 406 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 TCEAL1Q15170 157 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 ARL13AQ5H913 290 aaPredicted RBP16.5■□□□□ 0.23
SCAF1-201ENST00000360565 FSTL4Q6MZW2 842 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 MILR1Q7Z6M3 343 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 FBXW8Q8N3Y1 598 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 ARRDC4Q8NCT1 418 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 DQX1Q8TE96 717 aaKnown RBP16.5■□□□□ 0.23
SCAF1-201ENST00000360565 BDH2Q9BUT1 245 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 SNX10Q9Y5X0 201 aa16.5■□□□□ 0.23
SCAF1-201ENST00000360565 TTLL13PA6NNM8 815 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 EDIL3O43854 480 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 DEAF1O75398 565 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 KRT6AP02538 564 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 KRT6BP04259 564 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 L1CAMP32004 1257 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 KRT6CP48668 564 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 SLC25A11Q02978 314 aaKnown RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 SOWAHAQ2M3V2 549 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 BRMS1LQ5PSV4 323 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 MPP4Q96JB8 637 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 SH3GL1Q99961 368 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 FAM192AQ9GZU8 254 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 MYRFQ9Y2G1 1151 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 STYXL1Q9Y6J8 313 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 YJEFN3A6XGL0 299 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 CXorf49A8MYA2 514 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-201ENST00000360565 SOAT1P35610 550 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 ATP6V1E1P36543 226 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 VAC14Q08AM6 782 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 MPP2Q14168 576 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 LPCAT4Q643R3 524 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 FAM45BPQ6NSW5 357 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 AAGABQ6PD74 315 aa16.49■□□□□ 0.23
SCAF1-201ENST00000360565 FAM45AQ8TCE6 357 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms