RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CAPN5O15484 640 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SCN2BO60939 215 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CRHBPP24387 322 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CXCR2P25025 360 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 HLA-DMAP28067 261 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 HOXC13P31276 330 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 RFC2P35250 354 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PIK3CAP42336 1068 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PTGER2P43116 358 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 GJA9P57773 515 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 MERTKQ12866 999 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SNRNP35Q16560 246 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 RFX4Q33E94 735 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 LRIT3Q3SXY7 679 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 FAM209AQ5JX71 171 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ANKRD22Q5VYY1 191 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 NXNQ6DKJ4 435 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 MFSD7Q6UXD7 560 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ZNF782Q6ZMW2 699 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 UNC5AQ6ZN44 842 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 DYMQ7RTS9 669 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PROSER1Q86XN7 944 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 KIAA0825Q8IV33 1275 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 IGDCC3Q8IVU1 814 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CDKL3Q8IVW4 592 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ADGRG5Q8IZF4 528 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 WDTC1Q8N5D0 677 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 TTLL6Q8N841 843 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ANKRD42Q8N9B4 389 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 GLIS1Q8NBF1 620 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SPATA18Q8TC71 538 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ZNF578Q96N58 590 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SAMD11Q96NU1 681 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 MXRA8Q9BRK3 442 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 C11orf70Q9BRQ4 267 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 KIFC1Q9BW19 673 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SLIRPQ9GZT3 109 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 NIPAL2Q9H841 368 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 UBE2TQ9NPD8 197 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SMOXQ9NWM0 555 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 NXF1Q9UBU9 619 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 NUP50Q9UKX7 468 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CNOT6Q9ULM6 557 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 DERAQ9Y315 318 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 NOX1Q9Y5S8 564 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 FRMPD2Q68DX3 1309 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 LRCH4O75427 683 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 UPK1BO75841 260 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ZBTB7AO95365 584 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 OXSR1O95747 527 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 H2AFB1P0C5Y9 115 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 H2AFB2P0C5Z0 115 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 USP17L8P0C7I0 530 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 UBL4AP11441 157 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ZNF30P17039 623 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 EPHA3P29320 983 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SLCO1A2P46721 670 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 GALK1P51570 392 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PPP2R2BQ00005 443 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ACVR1Q04771 509 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 TMEM62Q0P6H9 643 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PDE1CQ14123 709 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 QRICH1Q2TAL8 776 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PIK3R6Q5UE93 754 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 GPR107Q5VW38 600 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 SLFN12LQ6IEE8 588 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 DARS2Q6PI48 645 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 OLFML1Q6UWY5 402 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 KIAA0408Q6ZU52 694 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 TMEM179Q6ZVK1 233 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PRUNE1Q86TP1 453 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 LRRTM3Q86VH5 581 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 EIF4E3Q8N5X7 224 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 RHOXF1Q8NHV9 184 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 C1orf54Q8WWF1 131 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 RMDN1Q96DB5 314 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 MASTLQ96GX5 879 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 HSFY1Q96LI6 401 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 UIMC1Q96RL1 719 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 TRIT1Q9H3H1 467 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 RMI1Q9H9A7 625 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ZNF408Q9H9D4 720 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 EFCAB1Q9HAE3 211 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 RC3H2Q9HBD1 1191 aaKnown RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 C3orf14Q9HBI5 128 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ARHGEF38Q9NXL2 777 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CACNA2D2Q9NY47 1150 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 RBAKQ9NYW8 714 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 WRAP73Q9P2S5 460 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ADAMTS5Q9UNA0 930 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CHMP2BQ9UQN3 213 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 NIP7Q9Y221 180 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ASB4Q9Y574 426 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 ASB1Q9Y576 335 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 PLXNA2O75051 1894 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CAPN8A6NHC0 703 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 KPNA7A9QM74 516 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 CFAP99D6REC4 459 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 HRO43593 1189 aa4.57□□□□□ -1.68
PTPN22-201ENST00000359785 TMEM127O75204 238 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms