RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ATP6V0D2Q8N8Y2 350 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 MCUQ8NE86 351 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ACVR1CQ8NER5 493 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 TCP10LQ8TDR4 215 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SLC44A1Q8WWI5 657 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 GIMAP1Q8WWP7 306 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 NACC2Q96BF6 587 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 BTN2A3PQ96KV6 586 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PRICKLE1Q96MT3 831 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF317Q96PQ6 595 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SMC6Q96SB8 1091 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ELAC2Q9BQ52 826 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 DHRS4Q9BTZ2 278 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SPON2Q9BUD6 331 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 TRIM62Q9BVG3 475 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 STMN4Q9H169 189 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CNOT10Q9H9A5 744 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CERS4Q9HA82 394 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 XAB2Q9HCS7 855 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SLCO1B3Q9NPD5 702 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CLIC5Q9NZA1 410 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 IGSF9Q9P2J2 1179 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 RABL2AQ9UBK7 228 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SLC2A6Q9UGQ3 507 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 AFF4Q9UHB7 1163 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 DNMT3LQ9UJW3 386 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 TMED5Q9Y3A6 229 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PCDHA11Q9Y5I1 949 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ZFP37Q9Y6Q3 630 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 VCANP13611 3396 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CCDC195A0A1B0GUA6 201 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CARNS1A5YM72 827 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 FAM47DPA6NHR8 397 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 KIAA0355O15063 1070 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 MATN3O15232 486 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CCL16O15467 120 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 RFPL2O75678 378 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 STC2O76061 302 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 LUC7L3O95232 432 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CXCL14O95715 111 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PEX11BO96011 259 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PENKP01210 267 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SLC4A1P02730 911 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 MT-ND3P03897 115 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ZDHHC11BP0C7U3 371 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 LINC00271P0C7V0 271 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SAT1P21673 171 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SP100P23497 879 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 HOXC13P31276 330 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 TUFMP49411 452 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 NIPAL4Q0D2K0 466 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 DNAJC3Q13217 504 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SEPT6Q14141 434 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PTPRCAPQ14761 206 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 POLD3Q15054 466 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SPRED3Q2MJR0 410 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 KLHL38Q2WGJ6 581 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 HSP90AA5PQ58FG0 334 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PPM1JQ5JR12 505 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 HECTD3Q5T447 861 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ARMC3Q5W041 872 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 KCTD11Q693B1 232 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 LVRNQ6Q4G3 990 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CEP128Q6ZU80 1094 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 TMC7Q7Z402 723 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 RASSF3Q86WH2 238 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 LRRC6Q86X45 466 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PGBD5Q8N414 524 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 GSDMBQ8TAX9 411 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PTCD2Q8WV60 388 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CHMP6Q96FZ7 201 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 FAM111AQ96PZ2 611 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 TGS1Q96RS0 853 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 FERMT1Q9BQL6 677 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 MECRQ9BV79 373 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 UNKQ9C0B0 810 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 UBE2OQ9C0C9 1292 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 CAB39LQ9H9S4 337 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SP110Q9HB58 689 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 GLOD4Q9HC38 313 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ACSS2Q9NR19 701 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 MRPL17Q9NRX2 175 aaKnown RBP5.16□□□□□ -1.58
ATXN3-202ENST00000359366 PCMTD2Q9NV79 361 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 NKIRAS1Q9NYS0 192 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF212Q9UDV6 495 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 SLC24A2Q9UI40 661 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 INSL5Q9Y5Q6 135 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 BACE2Q9Y5Z0 518 aa5.16□□□□□ -1.58
ATXN3-202ENST00000359366 A0A1W2PRU2 124 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 TMEM221A6NGB7 291 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 F5H5T6 163 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 PER2O15055 1255 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 NCAM2O15394 837 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 FGF10O15520 208 aaPredicted RBP5.15□□□□□ -1.58
ATXN3-202ENST00000359366 TYROBPO43914 113 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 PEX14O75381 377 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 WFS1O76024 890 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 KIAA0754O94854 1291 aa5.15□□□□□ -1.58
ATXN3-202ENST00000359366 PARNO95453 639 aaKnown RBP5.15□□□□□ -1.58
ATXN3-202ENST00000359366 FAM107AO95990 144 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms