RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 MPP1Q00013 466 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 SLC9A4Q6AI14 798 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 FAM228AQ86W67 206 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 FAR2Q96K12 515 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 RBBP8Q99708 897 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 GATA5Q9BWX5 397 aaPredicted RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 GPR63Q9BZJ6 419 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 PRKD2Q9BZL6 878 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 ABCC13Q9NSE7 274 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 VTI1BQ9UEU0 232 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 FAM50BQ9Y247 325 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 E7ESA3 106 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 CCL22O00626 93 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 MRASO14807 208 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 MGEA5O60502 916 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 PIK3R1P27986 724 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 GMPRP36959 345 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 LIMK2P53671 638 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 RAB10P61026 200 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 CBX3Q13185 183 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 DCTN2Q13561 401 aaKnown RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 NRF1Q16656 503 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 FAM187BQ17R55 369 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 ARL13AQ5H913 290 aaPredicted RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 LIPMQ5VYY2 423 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 ECSITQ9BQ95 431 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 RHOJQ9H4E5 214 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 MID1IP1Q9NPA3 183 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 ANKRD6Q9Y2G4 727 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 CBX4O00257 560 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 PAGE1O75459 146 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 SERPINH1P50454 418 aaKnown RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 NEK3P51956 506 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 CDH13P55290 713 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 POLD3Q15054 466 aaPredicted RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 RAP1GAP2Q684P5 730 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 PTRHD1Q6GMV3 140 aaKnown RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 CGB2Q6NT52 195 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 MARK2Q7KZI7 788 aaKnown RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 DQX1Q8TE96 717 aaKnown RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 GIPC2Q8TF65 315 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 ZNF333Q96JL9 665 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 LENG8Q96PV6 779 aaPredicted RBP12.4□□□□□ -0.42
COL20A1-201ENST00000358894 SLC7A8Q9UHI5 535 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 CITO14578 2027 aa12.4□□□□□ -0.42
COL20A1-201ENST00000358894 IGKV6-21A0A0C4DH24 114 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 RGSL1A5PLK6 1076 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 WNT3AP56704 352 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 DAOAP59103 153 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 MRPS15P82914 257 aaKnown RBP12.4□□□□□ -0.43
COL20A1-201ENST00000358894 POU4F1Q01851 419 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 DDR2Q16832 855 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 FAM171A1Q5VUB5 890 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 ANGPTL8Q6UXH0 198 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 DENND6AQ8IWF6 608 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 DDHD1Q8NEL9 900 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 OR52K2Q8NGK3 314 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 ERLEC1Q96DZ1 483 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 PRDM16Q9HAZ2 1276 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 PREBQ9HCU5 417 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 COMMD3-BMI1R4GMX3 469 aa12.4□□□□□ -0.43
COL20A1-201ENST00000358894 FAM159BA6NKW6 160 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 SERPINF2P08697 491 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 DLDP09622 509 aaKnown RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 FGFR1P11362 822 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 PSMC3P17980 439 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 TFEBP19484 476 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 CCNFP41002 786 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 PPM1FP49593 454 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 DAB2P98082 770 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 IRF9Q00978 393 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 PCBP1Q15365 356 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 LDB1Q86U70 411 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 TAC4Q86UU9 113 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 DACT3Q96B18 629 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 NXNL1Q96CM4 212 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 KLHL25Q9H0H3 589 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 CYLDQ9NQC7 956 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 GID8Q9NWU2 228 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 TRMT6Q9UJA5 497 aaKnown RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 ORC6Q9Y5N6 252 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 PTCH2Q9Y6C5 1203 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 SAC3D1A6NKF1 404 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 ABLIM1O14639 778 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 CABYRO75952 493 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 VAV1P15498 845 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 SLC10A2Q12908 348 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 CAPRIN1Q14444 709 aaKnown RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 TRIM16LQ309B1 348 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 TMTC4Q5T4D3 741 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 ESRP1Q6NXG1 681 aaKnown RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 TMEM174Q8WUU8 243 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 SLC7A6OSQ96CW6 309 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-201ENST00000358894 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 RREB1Q92766 1687 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 MAN1A2O60476 641 aa12.39□□□□□ -0.43
COL20A1-201ENST00000358894 RFPL1O75677 317 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms