RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 LSMEM2Q8N112 164 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 PQLC1Q8N2U9 271 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ICA1LQ8NDH6 482 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 NXNL1Q96CM4 212 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 SGF29Q96ES7 293 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 TSGA13Q96PP4 275 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CDRT15Q96T59 188 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 OMDQ99983 421 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 GLOD4Q9HC38 313 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CSNK1G1Q9HCP0 422 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 DMAP1Q9NPF5 467 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 MIOSQ9NXC5 875 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 SLC2A6Q9UGQ3 507 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CPA4Q9UI42 421 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ST3GAL5Q9UNP4 418 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 TCAF1Q9Y4C2 921 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 DTNAQ9Y4J8 743 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 NYNRINQ9P2P1 1898 aaKnown RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 ARL5CA6NH57 179 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 TARM1B6A8C7 271 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 SLC22A2O15244 555 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 COL6A2P12110 1019 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 XRCC1P18887 633 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 CCNCP24863 283 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 PKNOX1P55347 436 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 MRPS6P82932 125 aaKnown RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 CCL14Q16627 93 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 GALNT15Q8N3T1 639 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 RNF148Q8N7C7 305 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 FCRL5Q96RD9 977 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 RTP3Q9BQQ7 232 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CENPKQ9BS16 269 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CCDC28BQ9BUN5 200 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 TRIM4Q9C037 500 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 UBE2OQ9C0C9 1292 aaKnown RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 OSBPL2Q9H1P3 480 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 MRPL46Q9H2W6 279 aaKnown RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 ATXN3LQ9H3M9 355 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ZNF385DQ9H6B1 395 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ZBTB26Q9HCK0 441 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 C6orf203Q9P0P8 240 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 PSMD13Q9UNM6 376 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CLEC11AQ9Y240 323 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 MIA3Q5JRA6 1907 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 CAPN8A6NHC0 703 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 IRAK2O43187 625 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 MSI1O43347 362 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 MAFKO60675 156 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 HLA-DQB2P05538 268 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 PAMP19021 973 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 MSX2P35548 267 aaPredicted RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 CHRNA4P43681 627 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 ALDH1A3P47895 512 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 ARCN1P48444 511 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 CD151P48509 253 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 ATXN3P54252 364 aaPredicted RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 SLC12A2P55011 1212 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 GEMP55040 296 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 ROR2Q01974 943 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 MAP2K5Q13163 448 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 ART3Q13508 389 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 CNGA3Q16281 694 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 PIGGQ5H8A4 983 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 SH2D4BQ5SQS7 431 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 TSTD2Q5T7W7 516 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 OGFRL1Q5TC84 451 aaPredicted RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 DENND5AQ6IQ26 1287 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 TAF2Q6P1X5 1199 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 EP400NLQ6ZTU2 488 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 KLHDC8BQ8IXV7 354 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 PGAM4Q8N0Y7 254 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 CPSF7Q8N684 471 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 TXNDC5Q8NBS9 432 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 SCAMP5Q8TAC9 235 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 HASPINQ8TF76 798 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 GCNAQ96QF7 691 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 PTPN18Q99952 460 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 POMKQ9H5K3 350 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 WDR41Q9HAD4 459 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 GTSE1Q9NYZ3 720 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 FIS1Q9Y3D6 152 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 COL4A4P53420 1690 aaPredicted RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 PAGE1O75459 146 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 B3GAT3O94766 335 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 CYP2C18P33260 490 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 TAS2R39P59534 338 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 PURAQ00577 322 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 PDK3Q15120 406 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 FSCN1Q16658 493 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 UPP1Q16831 310 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 RARS2Q5T160 578 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 RASIP1Q5U651 963 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 FBXL19Q6PCT2 694 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 POTEHQ6S545 545 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 TMA16Q96EY4 203 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 DCUN1D1Q96GG9 259 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 GPR78Q96P69 363 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 IL12RB2Q99665 862 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 TRIM62Q9BVG3 475 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms