RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 GIPC2Q8TF65 315 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 PABPC5Q96DU9 382 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 RILPQ96NA2 401 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 PLEKHG4BQ96PX9 1271 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 NR1H4Q96RI1 486 aaPredicted RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 IPO11Q9UI26 975 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 ADAM28Q9UKQ2 775 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 SOX13Q9UN79 622 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 A0A096LPK6 155 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 MOXD2PA6NHM9 499 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 ERI2A8K979 691 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 J3KR12 359 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 INPPL1O15357 1258 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 PHGDHO43175 533 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 HNRNPCL1O60812 293 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 COQ9O75208 318 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 PROCP04070 461 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 CYP2C18P33260 490 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 SPRP35270 261 aaPredicted RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 ZNF135P52742 658 aaPredicted RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 ALDH18A1P54886 795 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 ITGA9Q13797 1035 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 RAP1GAP2Q684P5 730 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 MON1AQ86VX9 555 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 RTL3Q8N8U3 475 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 AGR3Q8TD06 166 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 FAM161BQ96MY7 647 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 FTHL17Q9BXU8 183 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 OXCT2Q9BYC2 517 aaPredicted RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 NOL6Q9H6R4 1146 aaKnown RBP16.22■□□□□ 0.19
PTPN5-201ENST00000358540 TMEM165Q9HC07 324 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 PCDH10Q9P2E7 1040 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 SCML2Q9UQR0 700 aa16.22■□□□□ 0.19
PTPN5-201ENST00000358540 MATN3O15232 486 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 HNRNPRO43390 633 aaKnown RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 SNNO75324 88 aaPredicted RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 VAPBO95292 243 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 HAPLN1P10915 354 aaPredicted RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 PGM1P36871 562 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 INHBCP55103 352 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 MLLT6P55198 1093 aaPredicted RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 FAM189BP81408 668 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 MPP1Q00013 466 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 TAF10Q12962 218 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 CTBP1Q13363 440 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 ZNF460Q14592 562 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 GRM3Q14832 879 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 GPNMBQ14956 572 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 ESRP1Q6NXG1 681 aaKnown RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 ACMSDQ8TDX5 336 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 HMCESQ96FZ2 354 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 VPS39Q96JC1 886 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 FSD1LQ9BXM9 530 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 SQORQ9Y6N5 450 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 MYO16Q9Y6X6 1858 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 FGF10O15520 208 aaPredicted RBP16.21■□□□□ 0.19
PTPN5-201ENST00000358540 DNAJC6O75061 913 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 NPY2RP49146 381 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 SLC11A1P49279 550 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 LSAMPQ13449 338 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 C10orf120Q5SQS8 335 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 RAPH1Q70E73 1250 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 TAS1R1Q7RTX1 841 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 NT5MQ9NPB1 228 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 DCDC2Q9UHG0 476 aa16.21■□□□□ 0.19
PTPN5-201ENST00000358540 PDLIM1O00151 329 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 ENPP3O14638 875 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 HOXC13P31276 330 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 ETFBP38117 255 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 GLRBP48167 497 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 SLC1A6P48664 564 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 SERPINB8P50452 374 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 NAB1Q13506 487 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 MS4A13Q5J8X5 152 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 RTP2Q5QGT7 225 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 ACBD5Q5T8D3 534 aaPredicted RBP16.21■□□□□ 0.18
PTPN5-201ENST00000358540 PRSS55Q6UWB4 352 aaPredicted RBP16.21■□□□□ 0.18
PTPN5-201ENST00000358540 RNF19BQ6ZMZ0 732 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 BEND5Q7L4P6 421 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 RBM12BQ8IXT5 1001 aaKnown RBP16.21■□□□□ 0.18
PTPN5-201ENST00000358540 SPATA6LQ8N4H0 392 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 PTCD3Q96EY7 689 aaKnown RBP16.21■□□□□ 0.18
PTPN5-201ENST00000358540 MYEOVQ96EZ4 313 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 SCLYQ96I15 445 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 IL12RB2Q99665 862 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 PNPOQ9NVS9 261 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 PCDHB7Q9Y5E2 793 aa16.21■□□□□ 0.18
PTPN5-201ENST00000358540 BIRC5O15392 142 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 GJB3O75712 270 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 ENO1P06733 434 aaKnown RBP16.2■□□□□ 0.18
PTPN5-201ENST00000358540 HOXD10P28358 340 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 DENND5AQ6IQ26 1287 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 TREML1Q86YW5 311 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 IGSF8Q969P0 613 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 NMD3Q96D46 503 aaKnown RBP16.2■□□□□ 0.18
PTPN5-201ENST00000358540 TSGA13Q96PP4 275 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 HMX1Q9NP08 348 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms