RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 UNKQ9C0B0 810 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PEX16Q9Y5Y5 336 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PMF1-BGLAPU3KQ54 211 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 C5orf60A6NFR6 353 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 MDM4O15151 490 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 OGTO15294 1046 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 SEC22BO75396 215 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 GPC1P35052 558 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PFKFB4Q16877 469 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 FOXR2Q6PJQ5 311 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CCDC185Q8N715 623 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 REXO5Q96IC2 774 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 TDRD1Q9BXT4 1180 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 MAGEE1Q9HCI5 957 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 GGA3Q9NZ52 723 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 EFR3BQ9Y2G0 817 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 GRK3P35626 688 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 LRRC55Q6ZSA7 311 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 FRMD7Q6ZUT3 714 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 C10orf107Q8IVU9 208 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 HM13Q8TCT9 377 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF606Q8WXB4 792 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 GSDMCQ9BYG8 508 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 EHD1Q9H4M9 534 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CD320Q9NPF0 282 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 NYAP2Q9P242 653 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 REXO2Q9Y3B8 237 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 A0A0A0MRY4 1105 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 SEC23AQ15436 765 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 MACC1Q6ZN28 852 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PHF10Q8WUB8 498 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 SPATA13Q96N96 652 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 TBCDQ9BTW9 1192 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 KLHL28Q9NXS3 571 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CHRNGP07510 517 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 MZF1P28698 734 aaPredicted RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 HARS2P49590 506 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CDK9P50750 372 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PTSQ03393 145 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 MED22Q15528 200 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 LDLRAP1Q5SW96 308 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 INTS11Q5TA45 600 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 NIPAL1Q6NVV3 410 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 STX12Q86Y82 276 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 FAM71AQ8IYT1 594 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 ARMC7Q9H6L4 198 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 SLC17A7Q9P2U7 560 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 TNPO3Q9Y5L0 923 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 MLYCDO95822 493 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 HMGCRP04035 888 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CYP4B1P13584 511 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 KDELR1P24390 212 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PSMA1P25786 263 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 TKFCQ3LXA3 575 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 ZCCHC8Q6NZY4 707 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 KCNT2Q6UVM3 1135 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PRR23CQ6ZRP0 262 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PTAR1Q7Z6K3 402 aaPredicted RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PHF12Q96QT6 1004 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CADM1Q9BY67 442 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 TRPV5Q9NQA5 729 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 SAMHD1Q9Y3Z3 626 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 EVPLQ92817 2033 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CSF1RP07333 972 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 DSG3P32926 999 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 C16orf46Q6P387 395 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 EFCAB3Q8N7B9 438 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 TMEM176AQ96HP8 235 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF570Q96NI8 536 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PURBQ96QR8 312 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 IRAK3Q9Y616 596 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 FER1L6Q2WGJ9 1857 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 SLC22A1O15245 554 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 S100A3P33764 101 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 VEPH1Q14D04 833 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CBWD6Q4V339 395 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CBWD3Q5JTY5 395 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 CBWD5Q5RIA9 395 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 SAMD3Q8N6K7 520 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 RNASE11Q8TAA1 199 aaKnown RBP8.85□□□□□ -0.99
COL6A6-201ENST00000358511 ARHGAP28Q9P2N2 729 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 PTPRUQ92729 1446 aa8.85□□□□□ -0.99
COL6A6-201ENST00000358511 STAU1O95793 577 aaKnown RBP8.84□□□□□ -0.99
COL6A6-201ENST00000358511 THRBP10828 461 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 HNF4AP41235 474 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 MTHFRP42898 656 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 HIRAP54198 1017 aaPredicted RBP8.84□□□□□ -0.99
COL6A6-201ENST00000358511 CCNIQ14094 377 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 IL18Q14116 193 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 CXXC5Q7LFL8 322 aaKnown RBP8.84□□□□□ -0.99
COL6A6-201ENST00000358511 POMGNT2Q8NAT1 580 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 TAS2R14Q9NYV8 317 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 WASF2Q9Y6W5 498 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 ROBO3Q96MS0 1386 aa8.84□□□□□ -0.99
COL6A6-201ENST00000358511 CPB1P15086 417 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms