RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 HCAR2Q8TDS4 363 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ARHGEF2Q92974 986 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 ISG20Q96AZ6 181 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 NAT9Q9BTE0 207 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 APPL1Q9UKG1 709 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 TLK1Q9UKI8 766 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 VIPR1P32241 457 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 RGS4P49798 205 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ADGRE1Q14246 886 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ELAVL3Q14576 367 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 LYSMD4Q5XG99 296 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 KDELC2Q7Z4H8 507 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 DCP2Q8IU60 420 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 TMIEQ8NEW7 156 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 AHCYL2Q96HN2 611 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 ZFYVE19Q96K21 471 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 FEM1AQ9BSK4 669 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ACE2Q9BYF1 805 aaPredicted RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 PCDH9Q9HC56 1237 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 NDFIP2Q9NV92 336 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 FAM92AA1XBS5 289 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 WASH4PA8MWX3 477 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 PRAMEF11O60813 436 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 RNF40O75150 1001 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 EZRP15311 586 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 CLCN5P51795 746 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 RPS21P63220 83 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 TFF2Q03403 129 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 FCHO2Q0JRZ9 810 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 SIM2Q14190 667 aaPredicted RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 TAF5Q15542 800 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 INO80DQ53TQ3 878 aaPredicted RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 PTRHD1Q6GMV3 140 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 DYDC1Q8WWB3 177 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 SEMA3CQ99985 751 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 TM6SF2Q9BZW4 377 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 PYCARDQ9ULZ3 195 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ANGPTL3Q9Y5C1 460 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ATP9BO43861 1147 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 RHOXF2BP0C7M4 288 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 CTHP32929 405 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 SCARA3Q6AZY7 606 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 AFTPHQ6ULP2 937 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 FBXL6Q8N531 539 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ALLCQ8N6M5 410 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 EDAQ92838 391 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 RHOXF2Q9BQY4 288 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 PFDN4Q9NQP4 134 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 CER1O95813 267 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 MSH2P43246 934 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 CDK18Q07002 472 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 FAXCQ5TGI0 409 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 RAPH1Q70E73 1250 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 GKN2Q86XP6 184 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 CENPIQ92674 756 aaPredicted RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 SLC25A51Q9H1U9 297 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 TNKS2Q9H2K2 1166 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 EVLQ9UI08 416 aaPredicted RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 EP400Q96L91 3159 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SOCS5O75159 536 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 RPP40O75818 363 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 GSTA2P09210 222 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 GRIA4P48058 902 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ARRB1P49407 418 aaPredicted RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 CDK16Q00536 496 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 C2orf54Q08AI8 447 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SERINC3Q13530 473 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 PAFAH1B3Q15102 231 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 ERN2Q76MJ5 926 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 TMEM25Q86YD3 366 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 WDTC1Q8N5D0 677 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SLC39A8Q9C0K1 460 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SEMA4AQ9H3S1 761 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SUV39H2Q9H5I1 410 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 PREBQ9HCU5 417 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 NCKIPSDQ9NZQ3 722 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 RAI2Q9Y5P3 530 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 UPK3BL1B0FP48 263 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 UPK3BL2E5RIL1 263 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 EIF3HO15372 352 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■□□□□ 9.7
UPF2-202ENST00000357604 TNFP01375 233 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ATP1A1P05023 1023 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 UGT2B4P06133 528 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 TAC1P20366 129 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 CD6P30203 668 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ZP2Q05996 745 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 HIF1AQ16665 826 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 SLC5A9Q2M3M2 681 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ANKRD20A2Q5SQ80 823 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ANKRD20A1Q5TYW2 823 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ANKRD20A3Q5VUR7 823 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ARMC3Q5W041 872 aa9.3□□□□□ -0.92
UPF2-202ENST00000357604 ESRP1Q6NXG1 681 aaKnown RBP9.3□□□□□ -0.92
UPF2-202ENST00000357604 TAX1BP1Q86VP1 789 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms