RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 EPHX1P07099 455 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 MMP2P08253 660 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 COL9A1P20849 921 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 PSMB4P28070 264 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 NTSR1P30989 418 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 P3H1Q32P28 736 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 CWF19L1Q69YN2 538 aaKnown RBP25.74■■□□□ 1.71
SSBP3-202ENST00000357475 JAMLQ86YT9 394 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 FLCNQ8NFG4 579 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 SPATA22Q8NHS9 363 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 FERMT1Q9BQL6 677 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 NOD2Q9HC29 1040 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 TRHDEQ9UKU6 1024 aa25.74■■□□□ 1.71
SSBP3-202ENST00000357475 OPHN1O60890 802 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 STK10O94804 968 aaKnown RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 SCNN1BP51168 640 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 TERF1P54274 439 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 LMNB2Q03252 620 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 CARD16Q5EG05 197 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 METTL3Q86U44 580 aaKnown RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 BBS5Q8N3I7 341 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 RYBPQ8N488 228 aaPredicted RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 MMGT1Q8N4V1 131 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 OR2AP1Q8NGE2 309 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 KCNV2Q8TDN2 545 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 GRK7Q8WTQ7 553 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 GABRG3Q99928 467 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 HINFPQ9BQA5 517 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 LRRC1Q9BTT6 524 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 POLR1EQ9GZS1 481 aaKnown RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 GBA3Q9H227 469 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 PRSS16Q9NQE7 514 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 RSPH14Q9UHP6 348 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 DCNP07585 359 aaKnown RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 CCNHP51946 323 aaPredicted RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 PPP1R7Q15435 360 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 SYCP2LQ5T4T6 812 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 ALG1LQ6GMV1 187 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 ARHGEF18Q6ZSZ5 1173 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 PRPF39Q86UA1 669 aaKnown RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 STK40Q8N2I9 435 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 OXNAD1Q96HP4 312 aaPredicted RBP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 RBM15Q96T37 977 aaKnown RBP eCLIP25.73■■□□□ 1.71
SSBP3-202ENST00000357475 NELL2Q99435 816 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 PCDH9Q9HC56 1237 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 UBP1Q9NZI7 540 aa25.73■■□□□ 1.71
SSBP3-202ENST00000357475 EDDM13A0A1B0GTR0 161 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 A0A1W2PQF6 199 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 IGSF6O95976 241 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 GAS8O95995 478 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 MT-CYBP00156 380 aaPredicted RBP25.72■■□□□ 1.71
SSBP3-202ENST00000357475 GSRP00390 522 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 CTSLP07711 333 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 SNRPD1P62314 119 aaKnown RBP25.72■■□□□ 1.71
SSBP3-202ENST00000357475 NSUN2Q08J23 767 aaKnown RBP eCLIP25.72■■□□□ 1.71
SSBP3-202ENST00000357475 DHX34Q14147 1143 aaKnown RBP25.72■■□□□ 1.71
SSBP3-202ENST00000357475 LRRC32Q14392 662 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 TMEM92Q6UXU6 159 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 SRLQ86TD4 932 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 IMP4Q96G21 291 aaKnown RBP25.72■■□□□ 1.71
SSBP3-202ENST00000357475 GDAP1L1Q96MZ0 367 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 NUDCD1Q96RS6 583 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 MFSD1Q9H3U5 465 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 SCUBE2Q9NQ36 999 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 SLC8A2Q9UPR5 921 aa25.72■■□□□ 1.71
SSBP3-202ENST00000357475 RIOK3O14730 519 aaKnown RBP25.71■■□□□ 1.71
SSBP3-202ENST00000357475 NPC1O15118 1278 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 PI15O43692 258 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 PIGNO95427 931 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 HSPA9P38646 679 aaKnown RBP25.71■■□□□ 1.71
SSBP3-202ENST00000357475 CD86P42081 329 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 SLC7A5Q01650 507 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 PTK6Q13882 451 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 MYLK3Q32MK0 819 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 NCEH1Q6PIU2 408 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 RUNDC3BQ96NL0 473 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 MLPHQ9BV36 600 aaPredicted RBP25.71■■□□□ 1.71
SSBP3-202ENST00000357475 SLC25A51Q9H1U9 297 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 ZDHHC6Q9H6R6 413 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 ETNK1Q9HBU6 452 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 CD248Q9HCU0 757 aa25.71■■□□□ 1.71
SSBP3-202ENST00000357475 HOXB2P14652 356 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 SKOR1P84550 965 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 GPS1Q13098 491 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 GRIN3AQ8TCU5 1115 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 CLDN23Q96B33 292 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 FCRL5Q96RD9 977 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 FAM129BQ96TA1 746 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 PAK5Q9P286 719 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 FEZ2Q9UHY8 353 aaPredicted RBP25.7■■□□□ 1.7
SSBP3-202ENST00000357475 MMP17Q9ULZ9 603 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 SIT1Q9Y3P8 196 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 WASF2Q9Y6W5 498 aa25.7■■□□□ 1.7
SSBP3-202ENST00000357475 TMEM221A6NGB7 291 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 M0R296 226 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 ZNF189O75820 626 aaPredicted RBP25.69■■□□□ 1.7
SSBP3-202ENST00000357475 OLIG2Q13516 323 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 CAMK2GQ13555 558 aaPredicted RBP25.69■■□□□ 1.7
SSBP3-202ENST00000357475 ITPRIPL1Q6GPH6 555 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 C8orf74Q6P047 294 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms