RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CLN6Q9NWW5 311 aa15□□□□□ -0.01
CHD4-201ENST00000357008 KPNA6O60684 536 aa15□□□□□ -0.01
CHD4-201ENST00000357008 USP17L7P0C7H9 530 aa15□□□□□ -0.01
CHD4-201ENST00000357008 POLD2P49005 469 aa15□□□□□ -0.01
CHD4-201ENST00000357008 PTSQ03393 145 aa15□□□□□ -0.01
CHD4-201ENST00000357008 RFX4Q33E94 735 aa15□□□□□ -0.01
CHD4-201ENST00000357008 HSFY1Q96LI6 401 aa15□□□□□ -0.01
CHD4-201ENST00000357008 FHDC1Q9C0D6 1143 aaPredicted RBP15□□□□□ -0.01
CHD4-201ENST00000357008 SNX6Q9UNH7 406 aa15□□□□□ -0.01
CHD4-201ENST00000357008 TCRBV9S1A1TA0A576 114 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 RTN3O95197 1032 aaPredicted RBP14.99□□□□□ -0.01
CHD4-201ENST00000357008 IGSF6O95976 241 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 ALDH2P05091 517 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 ANXA5P08758 320 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 AMIGO2Q86SJ2 522 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 IZUMO1Q8IYV9 350 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 FAM13CQ8NE31 585 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 PSMA8Q8TAA3 256 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 FAM210AQ96ND0 272 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 STON1Q9Y6Q2 735 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.99□□□□□ -0.01
CHD4-201ENST00000357008 CYP3A7-CYP3A51PA0A087WV96 503 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 CCDC182A6NF36 153 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 PSMD10O75832 226 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 CYP3A7P24462 503 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 BCL2L1Q07817 233 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 ARMC12Q5T9G4 340 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 TMEM86AQ8N2M4 240 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 PQLC1Q8N2U9 271 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 RASGEF1CQ8N431 466 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 KCTD4Q8WVF5 259 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 RTKNQ9BST9 563 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 GSC2O15499 205 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 EPHA3P29320 983 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 PAGE2BQ5JRK9 111 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 MFSD5Q6N075 450 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 FAM183BPQ6ZVS7 135 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 ABCC13Q9NSE7 274 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 IKZF3Q9UKT9 509 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 A0A1W2PPM1 405 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 IDH3BO43837 385 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 POMCP01189 267 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 DBTP11182 482 aaKnown RBP14.99□□□□□ -0.01
CHD4-201ENST00000357008 HGFP14210 728 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 NOMO3P69849 1222 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 PRKG2Q13237 762 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 ITIH5Q86UX2 942 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 EFCAB3Q8N7B9 438 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 CDH19Q9H159 772 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 CCNB1IP1Q9NPC3 277 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 NFASCO94856 1347 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 CDH3P22223 829 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 ADCY4Q8NFM4 1077 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 GIPC3Q8TF64 312 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 USP7Q93009 1102 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 BORCS5Q969J3 196 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 FAM163AQ96GL9 167 aaPredicted RBP14.99□□□□□ -0.01
CHD4-201ENST00000357008 ARL8BQ9NVJ2 186 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 NFKBIL1Q9UBC1 381 aaPredicted RBP14.99□□□□□ -0.01
CHD4-201ENST00000357008 PSMD13Q9UNM6 376 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 ABCA9Q8IUA7 1624 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
CHD4-201ENST00000357008 TRAFD1O14545 582 aaPredicted RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 KLHL18O94889 574 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 FGFR1P11362 822 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 NFKB1P19838 968 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 FCGRTP55899 365 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 NDUFAF6Q330K2 333 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 HIPK1Q86Z02 1210 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 GSTCDQ8NEC7 633 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 MOSPD2Q8NHP6 518 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 QRFPRQ96P65 431 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 SYNPO2Q9UMS6 1093 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 PRR5-ARHGAP8B1AHC4 643 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 CALCAP01258 141 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 NFICP08651 508 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 CRATP43155 626 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 LSM3P62310 102 aaKnown RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 ARHGAP8P85298 464 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 REXO5Q96IC2 774 aaKnown RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 NDNQ99608 321 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 JCADQ9P266 1359 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 CST1P01037 141 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 ETS2P15036 469 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 ZNF37AP17032 561 aaPredicted RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 ITGAXP20702 1163 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 SRP54P61011 504 aaKnown RBP14.98□□□□□ -0.01
CHD4-201ENST00000357008 IRF8Q02556 426 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 DPYSQ14117 519 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 PLCL1Q15111 1095 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 CYP2A13Q16696 494 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 DNAJB3Q8WWF6 145 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 SNX15Q9NRS6 342 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 TBC1D30Q9Y2I9 924 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 CABYRO75952 493 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 RPN2P04844 631 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 ALOX5P09917 674 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 ITGA2P17301 1181 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 SLC26A3P40879 764 aa14.98□□□□□ -0.01
CHD4-201ENST00000357008 GNA13Q14344 377 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms